LOCUS BC006156 1836 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens spinster homolog 1 (Drosophila), mRNA (cDNA clone
IMAGE:3627317), partial cds.
ACCESSION BC006156
VERSION BC006156.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1836)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1836)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: h Column: 10.
FEATURES Location/Qualifiers
source 1..1836
/db_xref="H-InvDB:HIT000086603"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3627317"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1836
/gene="SPNS1"
/gene_synonym="HSpin1"
/gene_synonym="LAT"
/gene_synonym="nrs"
/gene_synonym="PP2030"
/gene_synonym="SPIN1"
/gene_synonym="SPINL"
/db_xref="GeneID:83985"
/db_xref="HGNC:HGNC:30621"
CDS <1..1575
/gene="SPNS1"
/gene_synonym="HSpin1"
/gene_synonym="LAT"
/gene_synonym="nrs"
/gene_synonym="PP2030"
/gene_synonym="SPIN1"
/gene_synonym="SPINL"
/codon_start=1
/product="SPNS1 protein"
/protein_id="AAH06156.1"
/db_xref="GeneID:83985"
/db_xref="HGNC:HGNC:30621"
/translation="DTAPFLSQADDPDDGPVPGTPGLPGSTGNPKSEEPEVPDQEGLQ
RITGLSPGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFFNIGDSSSGLIQTVFIS
SYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHFWLLLLTRGLVGVGE
ASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMAGDWHWALRV
TPGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLRALARNPSFVLSSLGF
TAVAFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVG
LGVEISRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATYIFIFIGETLLS
MNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRLRRNWPPSFL
SEFRALQFSLMLCAFVGALGGAAFLGTAIFIEADRRRAQLHVQGLLHEAGSTDDRIVV
PQRGRSTRVPVASVLI"
BASE COUNT 281 a 604 c 552 g 399 t
ORIGIN
1 gacaccgcgc ccttcctcag ccaggcggat gacccggacg acgggccagt gcctggcacc
61 ccggggttgc cagggtccac ggggaacccg aagtccgagg agcccgaggt cccggaccag
121 gaggggctgc agcgcatcac cggcctgtct cccggccgtt cggctctcat agtggcggtg
181 ctgtgctaca tcaatctcct gaactacatg gaccgcttca ccgtggctgg cgtccttccc
241 gacatcgagc agttcttcaa catcggggac agtagctctg ggctcatcca gaccgtgttc
301 atctccagtt acatggtgtt ggcacctgtg tttggctacc tgggtgacag gtacaatcgg
361 aagtatctca tgtgcggggg cattgccttc tggtccctgg tgacactggg gtcatccttc
421 atccccggag agcatttctg gctgctcctc ctgacccggg gcctggtggg ggtcggggag
481 gccagttatt ccaccatcgc gcccactctc attgccgacc tctttgtggc cgaccagcgg
541 agccggatgc tcagcatctt ctactttgcc attccggtgg gcagtggtct gggctacatt
601 gcaggctcca aagtgaagga tatggctgga gactggcact gggctctgag ggtgacaccg
661 ggtctaggag tggtggccgt tctgctgctg ttcctggtag tgcgggagcc gccaagggga
721 gccgtggagc gccactcaga tttgccaccc ctgaacccca cctcgtggtg ggcagatctg
781 agggctctgg caagaaatcc tagtttcgtc ctgtcttccc tgggcttcac tgctgtggcc
841 tttgtcacgg gctccctggc tctgtgggct ccggcattcc tgctgcgttc ccgcgtggtc
901 cttggggaga ccccaccctg ccttcccgga gactcctgct cttcctctga cagtctcatc
961 tttggactca tcacctgcct gaccggagtc ctgggtgtgg gcctgggtgt ggagatcagc
1021 cgccggctcc gccactccaa cccccgggct gatcccctgg tctgtgccac tggcctcctg
1081 ggctctgcac ccttcctctt cctgtccctt gcctgcgccc gtggtagcat cgtggccact
1141 tatattttca tcttcattgg agagaccctc ctgtccatga actgggccat cgtggccgac
1201 attctgctgt acgtggtgat ccctacccga cgctccaccg ccgaggcctt ccagatcgtg
1261 ctgtcccacc tgctgggtga tgctgggagc ccctacctca ttggcctgat ctctgaccgc
1321 ctgcgccgga actggccccc ctccttcttg tccgagttcc gggctctgca gttctcgctc
1381 atgctctgcg cgtttgttgg ggcactgggc ggcgcagcct tcctgggcac cgccatcttc
1441 attgaggccg accgccggcg ggcacagctg cacgtgcagg gcctgctgca cgaagcaggg
1501 tccacagacg accggattgt ggtgccccag cggggccgct ccacccgcgt gcccgtggcc
1561 agtgtgctca tctgagaggc tgccgctcac ctacctgcac atctgccaca gctggccctg
1621 ggcccacccc acgaagggcc tgggcctaac cccttggcct ggcccagctt ccagagggac
1681 cctgggccgt gtgccagctc ccagacacta catgggtagc tcaggggagg aggtgggggt
1741 ccaggagggg gatccctctc cacaggggca gccccaaggg ctcggtgcta tttgtaacgg
1801 aataaaattt gtagccagaa aaaaaaaaaa aaaaaa
//