LOCUS BC006152 1937 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens alveolar soft part sarcoma chromosome region,
candidate 1, mRNA (cDNA clone MGC:13171 IMAGE:3357489), complete
cds.
ACCESSION BC006152
VERSION BC006152.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1937)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1937)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: d Column: 17.
FEATURES Location/Qualifiers
source 1..1937
/db_xref="H-InvDB:HIT000050461"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13171 IMAGE:3357489"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1937
/gene="ASPSCR1"
/gene_synonym="ASPCR1"
/gene_synonym="ASPL"
/gene_synonym="ASPS"
/gene_synonym="RCC17"
/db_xref="GeneID:79058"
/db_xref="MIM:606236"
CDS 284..1330
/gene="ASPSCR1"
/gene_synonym="ASPCR1"
/gene_synonym="ASPL"
/gene_synonym="ASPS"
/gene_synonym="RCC17"
/codon_start=1
/product="ASPSCR1 protein"
/protein_id="AAH06152.1"
/db_xref="GeneID:79058"
/db_xref="MIM:606236"
/translation="MVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSHF
PQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVG
KTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAP
AAAPFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQ
EQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVR
RRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPRRSLSLSPRLESVVPSQLTASS
ASRVQVVLLPQPPK"
BASE COUNT 386 a 603 c 612 g 336 t
ORIGIN
1 tgcactttta cttgggcacc ttgtgaccgc gaatcaatta aatgtaaaag tattggctgg
61 gcgcggtggc tcacgcctgt aaatcccagc actgtgggat gccgaggcgg gtggatcacg
121 aggtcaagag atcaagacca tcctggctaa aacggttctg gaggacacgt gccggcggca
181 ggacttcaac ccctgtgaat atgatctgaa gtttcagagg agcgtgctcg acctttctct
241 ccagtggaga tttgccaacc tgcccaacaa tgccaagctg gagatggtgc ctgcttcccg
301 gagccgtgag gggcctgaga acatggttcg catcgctttg cagctggacg atggctcgag
361 gttgcaggac tctttctgtt caggccagac cctctgggag cttctcagcc attttccaca
421 gatcagggag tgcctgcagc accccggcgg ggccacccca gtctgcgtgt acacgaggga
481 tgaggtgacg ggtgaagctg ccctgcgggg cacgacgctg cagtcgctgg gcctgaccgg
541 gggcagcgcc accatcaggt ttgtcatgaa gtgctacgac cccgtgggca agaccccagg
601 aagcctgggc tcgtcagcgt cggctggcca ggcagccgcc agcgctccac ttcccttgga
661 atctggggag ctcagccgcg gcgacttgag ccgtccggag gacgcggaca cctcagggcc
721 ctgctgcgag cacactcagg agaagcagag cacaagggca cccgcagctg ccccctttgt
781 tcctttctcg ggtgggggac agagacaggg gggccctcct gggcccacga ggcctctgac
841 atcatcttca gctaagttgc cgaagtccct ctccagccct ggaggcccct ccaagccaaa
901 gaagtccaag tcgggccagg atccccagca ggagcaggag caggagcggg agcgggatcc
961 ccagcaggag caggagcggg agcggcccgt ggaccgggag cccgtggacc gggagccggt
1021 ggtgtgccac cccgacctgg aggagcggct gcaggcctgg ccagcggagc tgcctgatga
1081 gttctttgag ctgacggtgg acgacgtgag aagacgcttg gcccagctca agagtgagcg
1141 gaagcgcctg gaagaagccc ccttggtgac caaggccttc agggaggcgc agataaagga
1201 gaagctggag cgctacccaa gacggagtct ctctctgtcg cccaggctgg agtcagtggt
1261 gccatctcag ctcactgcaa gctccgcctc ccgggttcaa gtggttctcc tgcctcagcc
1321 tcccaagtag ctgggatttc aggtggctct gagggtcctg ttccccgacc gctacgtcct
1381 acagggcttc ttccgcccca gcgagacagt gggggacttg cgagacttcg tgaggagcca
1441 cctggggaac cccgagctgt cattttacct gttcatcacc cctccaaaaa cagtcctgga
1501 cgaccacacg cagaccctct ttcaggcgaa cctcttcccg gccgctctgg tgcacttggg
1561 agccgaggag ccggcaggtg tctacctgga gcctggcctg ctggagcatg ccatctcccc
1621 atctgcggcc gacgtgctgg tggccaggta catgtccagg gccgccgggt ccccttcccc
1681 attgccagcc cctgaccctg cacctaagtc tgagccagct gctgaggagg gggcgctggt
1741 cccccctgag cccatcccag ggacggccca gcccgtgaag aggagcctgg gcaaggtgcc
1801 caagtggctg aagctgccgg ccagcaagag gtgagagctg ccagcctgag gtgcccactc
1861 cgccagccac aggaccacct cctctgccag caggaataaa gacttgtgca tccctcaaaa
1921 aaaaaaaaaa aaaaaaa
//