LOCUS BC006151 1316 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens chromosome 19 open reading frame 48, mRNA (cDNA clone
MGC:13170 IMAGE:3354369), complete cds.
ACCESSION BC006151
VERSION BC006151.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1316)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1316)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: d Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40548383.
FEATURES Location/Qualifiers
source 1..1316
/db_xref="H-InvDB:HIT000032638"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13170 IMAGE:3354369"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1316
/gene="C19orf48"
/gene_synonym="MGC13170"
/db_xref="GeneID:84798"
/db_xref="HGNC:HGNC:29667"
CDS 555..908
/gene="C19orf48"
/gene_synonym="MGC13170"
/codon_start=1
/product="chromosome 19 open reading frame 48"
/protein_id="AAH06151.1"
/db_xref="GeneID:84798"
/db_xref="HGNC:HGNC:29667"
/translation="MTVLEAVLEIQAITGSRLLSMVPGPARPPGSCWDPTQCTRTWLL
SHTPRRRWISGLPRASCRLGEEPPPLPYCDQAYGEELSIRHRETWAWLSRTDTAWPGA
PGVKQARILGELLLV"
BASE COUNT 269 a 419 c 387 g 241 t
ORIGIN
1 cactcattaa gaacagagga ggctgcctgt tactcctggt gttgcatccc tccagacact
61 ctgctgtttc ctgcctaggc gtggctgcag ccatggctag gaaagcgctg ccacccaccc
121 acctgggcca gagctggttc tgctcctgct gcagggacac tgagctggct atctcggcgc
181 ttcgggcaag aactgcaaca ggctctcctg ggtcctgcag gtgtacagcc gggcccctgc
241 cttgtgcctc agctctcgag agctgctgct gccgggtgac ctgatccaac ctgataaggt
301 gccatcttca gctaccactg caaggccctg agggcaacag cagcacggca ctgcccaccc
361 ggctgctgat ggcctggtgc cagctgggag tcctcccggc acttcgaggc cactgagcca
421 cccttccagc cccagcccac catggacagg ggtatccagc ttcctcctca acctcgtcct
481 ctgcccctga gccagtgacg cccaaggaca tgcctgttac ccaggtcctg taccagcact
541 agctggtcaa gggcatgaca gtgctggagg ccgtcttgga gatccaggcc atcactggca
601 gcaggctgct ctccatggtg ccagggcccg ccaggccacc aggctcatgc tgggacccaa
661 cccagtgcac aaggacttgg ctgctgagcc acacacccag gagaaggtgg ataagtgggc
721 taccaagggc ttcctgcagg ctaggggagg agccaccccc gcttccctat tgtgaccagg
781 cctatgggga ggagctgtcc atacgccacc gtgagacctg ggcctggctc tcaaggacag
841 acaccgcctg gcctggtgct ccaggggtga agcaggccag aatcctgggg gagctgctcc
901 tggtttgagc tgcattcagg aagtgcggga catggtaggg gaggcaaaaa gccttgggca
961 ctaccctccc tgtggagctg ttcggtgtcc gtcgagctag ccacaccctg acaccatgtt
1021 caagggtacc ggaagagaag ggtgtctgcc cccaacctcc cctgtgggtg tcactggcca
1081 gatgtcatga gggaagcagg ccttgtgagt ggacactgac catgagtccc tggggggagt
1141 gatcccccag gcatcgtgtg ccatgttgca cttctgccca ggcagcaggg tgggtgggta
1201 ccatgggtgc ccacccctcc accacatggg gccccaaagc actgcaggcc aagcagggca
1261 accccacacc cttgacataa aagcatcttg aagcttttaa aaaaaaaaaa aaaaaa
//