LOCUS BC006146 1174 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens programmed cell death 2-like, mRNA (cDNA clone MGC:13096 IMAGE:3944994), complete cds. ACCESSION BC006146 VERSION BC006146.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1174) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1174) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 18 Row: l Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14150140. FEATURES Location/Qualifiers source 1..1174 /db_xref="H-InvDB:HIT000032634" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13096 IMAGE:3944994" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1174 /gene="PDCD2L" /gene_synonym="MGC13096" /db_xref="GeneID:84306" /db_xref="HGNC:HGNC:28194" CDS 34..1110 /gene="PDCD2L" /gene_synonym="MGC13096" /codon_start=1 /product="programmed cell death 2-like" /protein_id="AAH06146.1" /db_xref="GeneID:84306" /db_xref="HGNC:HGNC:28194" /translation="MAAVLKPVLLGLRDAPVHGSPTGPGAWTASKLGGIPDALPTVAA PRPVCQRCGQPLALVVQVYCPLEGSPFHRLLHVFACACPGCSTGGARSWKVFRSQCLQ VPEREAQDAQKQGNSLAAEDWCEGADDWGSDTEEGPSPQFTLDFGNDASSAKDVDWTA RLQDLRLQDAVLGAAHPVPPGLPLFLPYYICVADEDDYRDFVNLDHAHSLLRDYQQRE GIAMDQLLSQSLPNDGDEKYEKTIIKSGDQTFYKFMKRIAACQEQILRYSWSGEPLFL TCPTSEVTELPACSQCGGQRIFEFQLMPALVSMLKSANLGLSVEFGTILVYTCEKSCW PPNHQTPMEEFCIIQEDPDELLFK" BASE COUNT 271 a 294 c 328 g 281 t ORIGIN 1 tagtttgcgt tttcacctgg tcgcccggcg gccatggcgg ccgttctgaa gccggtgctg 61 ctgggccttc gagatgcgcc ggtgcacggc agccccacag ggccgggtgc ctggactgct 121 agcaagctgg gcggcattcc ggatgctctg cccaccgtgg ctgcgcccag gcccgtgtgt 181 cagcgctgcg ggcagccgct cgctctggtc gtgcaggtgt attgcccgct ggaaggctcc 241 ccgtttcacc gtctgctgca cgtgttcgcg tgcgcctgcc ccggctgtag caccggcggt 301 gcgcgcagct ggaaggtgtt ccgctcccag tgcctgcagg tgccagagag agaggcgcag 361 gacgctcaga aacagggaaa cagccttgca gctgaggact ggtgtgaagg tgctgatgac 421 tggggaagtg atactgagga ggggccttca ccacagttta ccttggattt tgggaatgat 481 gccagcagtg ccaaagacgt agactggact gctcggctcc aagacctccg cctgcaggat 541 gctgtcctgg gtgctgccca tcctgtgcct cctgggctgc cgctcttcct gccctactac 601 atctgtgttg cagatgagga tgattacagg gactttgtca acctggatca tgcccacagc 661 cttctgaggg actatcagca gagagaaggc attgccatgg atcagttgct ttcccaaagc 721 cttcctaatg atggtgatga aaaatatgag aagaccataa ttaaaagtgg agatcagacg 781 ttttacaaat tcatgaagcg aattgctgct tgtcaggagc agattttgag gtattcctgg 841 agtggagagc cactcttttt gacctgccct acatcagaag tcaccgagct cccagcctgc 901 agccagtgtg gaggccaaag gatatttgag tttcagctta tgccagcact ggtcagcatg 961 ctcaagagtg ctaatttagg tctttctgtg gaatttggaa caattctagt ttacacatgt 1021 gagaagagtt gctggccccc aaatcatcag actcccatgg aagaattttg tattatacaa 1081 gaagacccag atgaattatt gtttaagtag agcatttcct tttattaata taaattaaaa 1141 caaatgttta catccaaaaa aaaaaaaaaa aaaa //