LOCUS BC005991 1418 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens ubiquitin specific peptidase 45, mRNA (cDNA clone
IMAGE:4047601), complete cds.
ACCESSION BC005991
VERSION BC005991.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1418)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1418)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: m Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1418
/db_xref="H-InvDB:HIT000032575"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4047601"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1418
/gene="USP45"
/gene_synonym="MGC14793"
/db_xref="GeneID:85015"
/db_xref="HGNC:HGNC:20080"
CDS 52..921
/gene="USP45"
/gene_synonym="MGC14793"
/codon_start=1
/product="USP45 protein"
/protein_id="AAH05991.1"
/db_xref="GeneID:85015"
/db_xref="HGNC:HGNC:20080"
/translation="MRVKDPTKALPEKAKRSKRPTVPHDEDSSDDIAVGLTCQHVSHA
ISVNHVKRAIAENLWSVCSECLEERRFYDGQLVLTSDIWLCLKCGFQGCGKNSESQHS
LKHFKSSRTEPHCIIINLSTWIIWCYECDEKLSTHCNKKVLAQIVDFLQKHASKTQTS
AFSRIMKLCEEKCETDEIQKGGKCRNLSVRGITNLGNTCFFNAVMQNLAQTYTLTDLM
NEIKESSTKLKIFPSSDSQLDPLVVELSRPGPLTSALFLFLHSMKETEKGPLSPKVLF
NQLCQKRVHLHLI"
BASE COUNT 499 a 236 c 278 g 405 t
ORIGIN
1 agtctcccca ggttgtagac gctgcggccc ggcccggcgg gtaaataaca gatgcgggtg
61 aaagatccaa ctaaagcttt acctgagaaa gccaaaagaa gtaaaaggcc tactgtacct
121 catgatgaag actcttcaga tgatattgct gtaggtttaa cttgccaaca tgtaagtcat
181 gctatcagcg tgaatcatgt aaagagagca atagctgaga atctgtggtc agtttgctca
241 gaatgtttag aagaaagaag attctatgat gggcagctag tacttacttc tgatatttgg
301 ttgtgcctca agtgtggctt ccagggatgt ggtaaaaact cagaaagcca acattcattg
361 aagcacttta agagttccag aacagagccc cattgtatta taattaatct gagcacatgg
421 attatatggt gttatgaatg tgatgaaaaa ttatcaacgc attgtaataa gaaggttttg
481 gctcagatag ttgattttct ccagaaacat gcttctaaaa cacaaacaag tgcattttct
541 agaatcatga aactttgtga agaaaaatgt gaaacagatg aaatacagaa gggaggaaaa
601 tgcagaaatt tatctgtaag aggaattaca aatttaggaa atacttgctt ttttaatgca
661 gtcatgcaga acttggcaca gacttatact cttactgatc tgatgaatga gatcaaagaa
721 agtagtacaa aactcaagat ttttccttcc tcagactctc agctggaccc attggtggtg
781 gaactttcaa ggcctggacc actgacctca gccttgttcc tgtttcttca cagcatgaag
841 gagactgaaa aaggaccact ttctcctaaa gttcttttta atcagctttg tcagaagcgg
901 gtgcatctac atttaatata aataattatg agttacaaaa tactaatgta ttcatcattt
961 aacatgaata gtcgttttta ctgtaacttt gctcttattg ccctgactat gaagagaact
1021 aaaatttgtt acagctctat gctttatgaa aattatatct cagtcctcag aagaagcagc
1081 ttatcctcat atataaggaa atggagacac agaaattaaa tggctcacct agtctgagtg
1141 aaaagctgag aatcaaatgg agatctgtcc tgacttggat gcctatgttg taataccata
1201 aagtgagaaa accatagagt tgtaaaatct agaaagtacc gtaagataac atctaatcta
1261 gctttcttat tttaaaagat gagctgtgag gcaaatagag tttaagtgaa tttctcaagg
1321 tattacagta tgtttaaaaa ccaaatcctt atgtgcctgg aaataaacac ataaaggatc
1381 tgacttgtaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//