LOCUS BC005986 951 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens polyribonucleotide nucleotidyltransferase 1, mRNA
(cDNA clone IMAGE:3685398), partial cds.
ACCESSION BC005986
VERSION BC005986.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 951)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 951)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: g Column: 1.
FEATURES Location/Qualifiers
source 1..951
/db_xref="H-InvDB:HIT000086570"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3685398"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..951
/gene="PNPT1"
/gene_synonym="old-35"
/gene_synonym="OLD35"
/gene_synonym="PNPASE"
/db_xref="GeneID:87178"
CDS <1..792
/gene="PNPT1"
/gene_synonym="old-35"
/gene_synonym="OLD35"
/gene_synonym="PNPASE"
/codon_start=1
/product="PNPT1 protein"
/protein_id="AAH05986.1"
/db_xref="GeneID:87178"
/translation="KGEIEDYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLP
GIPIKIVMEAIQQASVAKKEILQIMNKTISKPRASRKENGPVVETVQVPLSKRAKFVG
PGGYNLKKLQAETGVTISQVDEETFSVFAPTPSAMHEARDFITEICKDDQEQQLEFGA
VYTATITEIRDTGVMVKLYPNMTAVLLHNTQLDQRKIKHPTALGLEVGQEIQVKYFGR
DPADGRMRLSRKVLQSPATTVVRTLNDRSSIVMGEPISQSSSNSQ"
misc_feature 7..696
/gene="PNPT1"
/gene_synonym="old-35"
/gene_synonym="OLD35"
/gene_synonym="PNPASE"
/note="Pnp; Region: Polyribonucleotide
nucleotidyltransferase (polynucleotide phosphorylase)
[Translation, ribosomal structure and biogenesis]"
/db_xref="CDD:COG1185"
BASE COUNT 351 a 149 c 187 g 264 t
ORIGIN
1 aagggtgaaa tagaagatta tcgtttgctg acagatattt tgggaattga agattacaat
61 ggtgacatgg acttcaaaat agctggcact aataaaggaa taactgcatt acaggctgat
121 attaaattac ccggaatacc aataaaaatt gtgatggagg ctattcaaca agcttcagtg
181 gcaaaaaagg agatattaca gatcatgaac aaaactattt caaaacctcg agcatctaga
241 aaagaaaatg gacctgttgt agaaactgtt caggttccat tatcaaaacg agcaaaattt
301 gttggacctg gtggctataa cttaaaaaaa cttcaggctg aaacaggtgt aactattagt
361 caggtggatg aagaaacgtt ttctgtattt gcaccaacac ccagtgctat gcatgaggca
421 agagacttca ttactgaaat ctgcaaggat gatcaggagc agcaattaga atttggagca
481 gtatataccg ccacaataac tgaaatcaga gatactggtg taatggtaaa attatatcca
541 aatatgactg cggtactgct tcataacaca caacttgatc aacgaaagat taaacatcct
601 actgccctag gattagaagt tggccaagaa attcaggtga aatactttgg acgtgaccca
661 gccgatggaa gaatgaggct ttctcgaaaa gtgcttcagt cgccagctac aaccgtggtc
721 agaactttga atgacagaag tagtattgta atgggagaac ctatttcaca gtcatcatct
781 aattctcagt gatttttttt tttaaagaga attctagaat tctattttgt ctagggtgat
841 gtgctgtaga gcaacatttt agtagtatct tccattgtgt agatttctat ataatataaa
901 tacattttaa ttatttgtac taaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//