LOCUS BC005978 1782 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens karyopherin alpha 2 (RAG cohort 1, importin alpha 1), mRNA (cDNA clone MGC:14668 IMAGE:4105058), complete cds. ACCESSION BC005978 VERSION BC005978.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1782) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1782) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 21 Row: p Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 62388891. FEATURES Location/Qualifiers source 1..1782 /db_xref="H-InvDB:HIT000032568_03" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:14668 IMAGE:4105058" /tissue_type="Bone marrow, acute myelogenous leukemia" /clone_lib="NIH_MGC_55" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1782 /gene="KPNA2" /gene_synonym="IPOA1" /gene_synonym="QIP2" /gene_synonym="SRP1alpha" /db_xref="GeneID:3838" /db_xref="HGNC:HGNC:6395" /db_xref="MIM:600685" CDS 130..1719 /gene="KPNA2" /gene_synonym="IPOA1" /gene_synonym="QIP2" /gene_synonym="SRP1alpha" /codon_start=1 /product="karyopherin alpha 2 (RAG cohort 1, importin alpha 1)" /protein_id="AAH05978.1" /db_xref="GeneID:3838" /db_xref="HGNC:HGNC:6395" /db_xref="MIM:600685" /translation="MSTNENANTPAARLHRFKNKGKDSTEMRRRRIEVNVELRKAKKD DQMLKRRNVSSFPDDATSPLQENRNNQGTVNWSVDDIVKGINSSNVENQLQATQAARK LLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKVVVD GGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDM SSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAIS YLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDA GALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFK TQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQA AENLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFSVEEEEDQNVVP ETTSEGYTFQVQDGAPGTFNF" BASE COUNT 518 a 407 c 403 g 454 t ORIGIN 1 acacggtctt tgagctgagt cgaggtggac cctttgaacg cagtcgccct acagccgctg 61 attccccccg catcgcctcc cgtggaagcc caggcccgct tcgcagcttt ctccctttgt 121 ctcataacca tgtccaccaa cgagaatgct aatacaccag ctgcccgtct tcacagattc 181 aagaacaagg gaaaagacag tacagaaatg aggcgtcgca gaatagaggt caatgtggag 241 ctgaggaaag ctaagaagga tgaccagatg ctgaagagga gaaatgtaag ctcatttcct 301 gatgatgcta cttctccgct gcaggaaaac cgcaacaacc agggcactgt aaattggtct 361 gttgatgaca ttgtcaaagg cataaatagc agcaatgtgg aaaatcagct ccaagctact 421 caagctgcca ggaaactact ttccagagaa aaacagcccc ccatagacaa cataatccgg 481 gctggtttga ttccgaaatt tgtgtccttc ttgggcagaa ctgattgtag tcccattcag 541 tttgaatctg cttgggcact cactaacatt gcttctggga catcagaaca aaccaaggtt 601 gtggtagatg gaggtgccat cccagcattc atttctctgt tggcatctcc ccatgctcac 661 atcagtgaac aagctgtctg ggctctagga aacattgcag gtgatggctc agtgttccga 721 gacttggtta ttaagtacgg tgcagttgac ccactgttgg ctctccttgc agttcctgat 781 atgtcatctt tagcatgtgg ctacttacgt aatcttacct ggacactttc taatctttgc 841 cgcaacaaga atcctgcacc cccgatagat gctgttgagc agattcttcc taccttagtt 901 cggctcctgc atcatgatga tccagaagta ttagcagata cctgctgggc tatttcctac 961 cttactgatg gtccaaatga acgaattggc atggtggtga aaacaggagt tgtgccccaa 1021 cttgtgaagc ttctaggagc ttctgaattg ccaattgtga ctcctgccct aagagccata 1081 gggaatattg tcactggtac agatgaacag actcaggttg tgattgatgc aggagcactc 1141 gccgtctttc ccagcctgct caccaacccc aaaactaaca ttcagaagga agctacgtgg 1201 acaatgtcaa acatcacagc cggccgccag gaccagatac agcaagttgt gaatcatgga 1261 ttagtcccat tccttgtcag cgttctctct aaggcagatt ttaagacaca aaaggaagct 1321 gtgtgggccg tgaccaacta taccagtggt ggaacagttg aacagattgt gtaccttgtt 1381 cactgtggca taatagaacc gttgatgaac ctcttaactg caaaagatac caagattatt 1441 ctggttatcc tggatgccat ttcaaatatc tttcaggctg ctgagaacct aggtgaaact 1501 gagaaactta gtataatgat tgaagaatgt ggaggcttag acaaaattga agctctacaa 1561 aaccatgaaa atgagtctgt gtataaggct tcgttaagct taattgagaa gtatttctct 1621 gtagaggaag aggaagatca aaacgttgta ccagaaacta cctctgaagg ctacactttc 1681 caagttcagg atggggctcc tgggaccttt aacttttaga tcatgtagct gagacataaa 1741 tttgttgtgt gcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //