LOCUS BC005974 1157 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens vesicle-associated membrane protein 4, mRNA (cDNA
clone MGC:14658 IMAGE:4102457), complete cds.
ACCESSION BC005974
VERSION BC005974.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1157)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1157)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42544206.
FEATURES Location/Qualifiers
source 1..1157
/db_xref="H-InvDB:HIT000032565"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14658 IMAGE:4102457"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1157
/gene="VAMP4"
/gene_synonym="VAMP24"
/db_xref="GeneID:8674"
/db_xref="HGNC:HGNC:12645"
/db_xref="MIM:606909"
CDS 118..543
/gene="VAMP4"
/gene_synonym="VAMP24"
/codon_start=1
/product="VAMP4 protein"
/protein_id="AAH05974.1"
/db_xref="GeneID:8674"
/db_xref="HGNC:HGNC:12645"
/db_xref="MIM:606909"
/translation="MPPKFKRHLNDDDVTGSVKSERRNLLEDDSDEEEDFFLRGPSGP
RFGPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRS
KQLRRQMWWRGCKIKAIMALVAAILLLVIIILIVMKYRT"
BASE COUNT 402 a 183 c 232 g 340 t
ORIGIN
1 accgccagcc cgggagagct gccgggagtt ccccgggagc gctgccggga gttccccggg
61 agcctcaggt ggtgactatc ctgttgagaa gcaaaagata ctttgcaagt aaaaaatatg
121 cctcccaagt ttaagcgcca cctcaatgat gatgatgtca caggttctgt gaaaagtgaa
181 aggagaaatc ttttggaaga tgattcagat gaagaagagg acttttttct aaggggacca
241 tctggaccaa gatttggacc tagaaatgat aaaattaagc atgttcagaa tcaagtggat
301 gaagttattg atgtcatgca agaaaatatt acaaaggtaa ttgagagagg ggagagacta
361 gatgaactac aggacaaatc agaaagctta tcggataatg caacagcttt tagcaacaga
421 tccaaacaac ttcgaaggca aatgtggtgg cgtggatgca aaataaaagc catcatggct
481 ttggttgctg ctatcctttt gctagtgatt atcattctta tagtcatgaa ataccgtact
541 tgatttgatg acagagatct tcattaaaca agatctggga cagtaataaa agattgctgc
601 ataatttaaa tgaaacctat gtgtatataa ctttcaaaac ttctttttca agaaactaag
661 aggcaagtat cacttcaaat tggaacgttg agaatgtcca attatcttct ccctttctaa
721 caaaatgttc ttttaataat tatgtttaag gcaaagagaa ctagcctcta tttttccata
781 tttcaaggat ctaatttgaa actagatact tgccagttca ttatttgtgt atataaacac
841 tgattataat atttcatatt aatattttaa tggcataagg acttgcatta ttgcattagg
901 gagcgggtca tgctggtggt caggaagcct gtgtagagta ccaaattata tgttgaaaga
961 gatgcataac cattctgtca atatttgcag aaatatagtt cctttcatat tacagttgtt
1021 ttgcaagcaa tttccacatt tataggtgta acaaaagcta aatgttgtaa atgttgttgc
1081 cctcaggtat aactaaaaac attccagtaa atatattttt gactgtgtaa aaaaaaaaaa
1141 aaaaaaaaaa aaaaaaa
//