LOCUS BC005948 835 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens small muscle protein, X-linked, mRNA (cDNA clone
MGC:14584 IMAGE:4246501), complete cds.
ACCESSION BC005948
VERSION BC005948.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 835)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 835)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: a Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10047089.
FEATURES Location/Qualifiers
source 1..835
/db_xref="H-InvDB:HIT000032546"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14584 IMAGE:4246501"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..835
/gene="SMPX"
/db_xref="GeneID:23676"
/db_xref="HGNC:HGNC:11122"
/db_xref="MIM:300226"
CDS 113..379
/gene="SMPX"
/codon_start=1
/product="small muscle protein, X-linked"
/protein_id="AAH05948.1"
/db_xref="GeneID:23676"
/db_xref="HGNC:HGNC:11122"
/db_xref="MIM:300226"
/translation="MNMSKQPVSNVRAIQANINIPMGAFRPGAGQPPRRKECTPEVEE
GVPPTSDEEKKPIPGAKKLPGPAVNLSEIQNIKSELKYVPKAEQ"
BASE COUNT 282 a 155 c 171 g 227 t
ORIGIN
1 agaggacacc gggcgcccct tccaccttcc aaggagcttt gtattcttgc atctggctgc
61 ctgggacttc ccttaggcag taaacaaata cataaagcag ggataagact gcatgaatat
121 gtcgaaacag ccagtttcca atgttagagc catccaggca aatatcaata ttccaatggg
181 agcctttcgg ccaggagcag gtcaaccccc cagaagaaaa gaatgtactc ctgaagtgga
241 ggagggtgtt cctcccacct cggatgagga gaagaagcca attccaggag cgaagaaact
301 tccaggacct gcagtcaatc tatcggaaat ccagaatatt aaaagtgaac taaaatatgt
361 ccccaaagct gaacagtagt aggaagaaaa aaggattgat gtgaagaaat aaagaggcag
421 aagatggatt caatagctca ctaaaatttt atatatttgt atgatgattg tgaacctcct
481 gaatgcctga gactctagca gaaatggcct gtttgtacat ttatatctct tccttctagt
541 tggctgtatt tcttacttta tcttcatttt tggcacctca cagaacaaat tagcccataa
601 attcaacacc tggagggtgt ggttttgagg agggatatga ttttatggag aatgatatgg
661 caatgtgcct aacgattttg atgaaaagtt tcccaagcta cttcctacag tattttggtc
721 aatatttgga atgcgtttta gttcttcacc ttttaaatta tgtcactaaa ctttgtatga
781 gttcaaataa atatttgact aaatgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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