LOCUS BC005943 1314 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens recombination activating gene 1 activating protein 1,
mRNA (cDNA clone MGC:14566 IMAGE:4076256), complete cds.
ACCESSION BC005943
VERSION BC005943.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1314)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1314)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: i Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10047123.
FEATURES Location/Qualifiers
source 1..1314
/db_xref="H-InvDB:HIT000032542"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14566 IMAGE:4076256"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1314
/gene="RAG1AP1"
/gene_synonym="RP11-540D14.5"
/gene_synonym="SCP"
/gene_synonym="slv"
/db_xref="GeneID:55974"
/db_xref="HGNC:HGNC:30657"
CDS 45..710
/gene="RAG1AP1"
/gene_synonym="RP11-540D14.5"
/gene_synonym="SCP"
/gene_synonym="slv"
/codon_start=1
/product="recombination activating gene 1 activating
protein 1"
/protein_id="AAH05943.1"
/db_xref="GeneID:55974"
/db_xref="HGNC:HGNC:30657"
/translation="MEAGGFLDSLIYGACVVFTLGMFSAGLSDLRHMRMTRSVDNVQF
LPFLTTEVNNLGWLSYGALKGDGILIVVNTVGAALQTLYILAYLHYCPRKRVVLLQTA
TLLGVLLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCL
SYPLTIATLLTSASWCLYGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWL
LQT"
BASE COUNT 312 a 338 c 330 g 334 t
ORIGIN
1 aggctcgcgg cgggcgctgg gcgcgggatc cgactctagt cgtaatggag gcgggcggct
61 ttctggactc gctcatttac ggagcatgcg tggtcttcac ccttggcatg ttctccgccg
121 gcctctcgga cctcaggcac atgcgaatga cccggagtgt ggacaacgtc cagttcctgc
181 cctttctcac cacggaagtc aacaacctgg gctggctgag ttatggggct ttgaagggag
241 acgggatcct catcgtcgtc aacacagtgg gtgctgcgct tcagaccctg tatatcttgg
301 catatctgca ttactgccct cggaagcgtg ttgtgctcct acagactgca accctgctag
361 gggtccttct cctgggttat ggctactttt ggctcctggt acccaaccct gaggcccggc
421 ttcagcagtt gggcctcttc tgcagtgtct tcaccatcag catgtacctc tcaccactgg
481 ctgacttggc taaggtgatt caaactaaat caacccaatg tctctcctac ccactcacca
541 ttgctaccct tctcacctct gcctcctggt gcctctatgg gtttcgactc agagatccct
601 atatcatggt gtccaacttt ccaggaatcg tcaccagctt tatccgcttc tggcttttct
661 ggaagtaccc ccaggagcaa gacaggaact actggctcct gcaaacctga ggctgctcat
721 ctgaccactg ggcaccttag tgccgacctg aaccaaagag acctccttgt ttcagctggg
781 cctgctgtcc agcttcccag gtgcagtggg ttgtgggaac aagagatgac tttgaggata
841 aaaggaccaa agaaaaagct ttacttagat gattgattgg ggcctaggag atgaaatcac
901 tttttatttt ttagagattt ttttttttaa ttttggaggt tggggtgcaa tctttagaat
961 atgccttaaa aggccgggcg cggtggctca cgcctgtaat cccagcactt tgggaggcca
1021 aggtgggcgg atcgcctgag gtcaggagtt caagaccaac ctgactaaca tggtgaaacc
1081 ccatctctac taaaaataca aaattagcca ggcatgatgg cacatgcctg taatcccaga
1141 tacttgggag gctgaggcag gagaattgct tgaacccagg aggtggaggt tgcagtgagc
1201 tgagatcgtg ccattgtgat atgaatatgc cttatatgct gatatgaata tgccttaaaa
1261 taaagtgttc cccacccctg ccataaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//