LOCUS BC005913 876 bp mRNA linear HUM 29-AUG-2008 DEFINITION Homo sapiens surfactant protein C, mRNA (cDNA clone MGC:14509 IMAGE:4043169), complete cds. ACCESSION BC005913 VERSION BC005913.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 876) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 876) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 21 Row: g Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42476334. FEATURES Location/Qualifiers source 1..876 /db_xref="H-InvDB:HIT000032517" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:14509 IMAGE:4043169" /tissue_type="Lung" /clone_lib="NIH_MGC_77" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..876 /gene="SFTPC" /gene_synonym="PSP-C" /gene_synonym="SMDP2" /gene_synonym="SP-C" /db_xref="GeneID:6440" /db_xref="HGNC:HGNC:10802" /db_xref="MIM:178620" CDS 32..625 /gene="SFTPC" /gene_synonym="PSP-C" /gene_synonym="SMDP2" /gene_synonym="SP-C" /codon_start=1 /product="surfactant protein C" /protein_id="AAH05913.1" /db_xref="GeneID:6440" /db_xref="HGNC:HGNC:10802" /db_xref="MIM:178620" /translation="MDVGSKEVLMESPPDYSAAPRGRFGIPCCPVHLKRLLIVVVVVV LIVVVIVGALLMGLHMSQKHTEMVLEMSIGAPEAQQRLALSEHLVTTATFSIGSTGLV VYDYQQLLIAYKPAPGTCCYIMKIAPESIPSLEALNRKVHNFQMECSLQAKPAVPTSK LGQAEGRDAGSAPSGGDPAFLGMAVNTLCGEVPLYYI" BASE COUNT 217 a 246 c 264 g 149 t ORIGIN 1 gaggagagga gagcatagca cctgcagcaa gatggatgtg ggcagcaaag aggtcctgat 61 ggagagcccg ccggactact ccgcagctcc ccggggccga tttggcattc cctgctgccc 121 agtgcacctg aaacgccttc ttatcgtggt ggtggtggtg gtcctcatcg tcgtggtgat 181 tgtgggagcc ctgctcatgg gtctccacat gagccagaaa cacacggaga tggttctgga 241 gatgagcatt ggggcgccgg aagcccagca acgcctggcc ctgagtgagc acctggttac 301 cactgccacc ttctccatcg gctccactgg cctcgtggtg tatgactacc agcagctgct 361 gatcgcctac aagccagccc ctggcacctg ctgctacatc atgaagatag ctccagagag 421 catccccagt cttgaggctc tcaatagaaa agtccacaac ttccagatgg aatgctctct 481 gcaggccaag cccgcagtgc ctacgtctaa gctgggccag gcagaggggc gagatgcagg 541 ctcagcaccc tccggagggg acccggcctt cctgggcatg gccgtgaaca ccctgtgtgg 601 cgaggtgccg ctctactaca tctaggacgc ctccgggtca gtggaagccc caacgggaaa 661 ggaaacgccc cgggcaaagg gtcttttgca gcttttgcag acgggcaaga agctgcttct 721 gcccacaccg cagggacaaa ccctggagaa atgggagctt ggggagagga tgggagtggg 781 cagaggtggc acccaggggc ccgggaactc ctgccacaac agaataaagc agcctgattg 841 aaaagcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa //