LOCUS BC005876 1003 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 21kDa, V0 subunit
b, mRNA (cDNA clone MGC:4498 IMAGE:2964510), complete cds.
ACCESSION BC005876
VERSION BC005876.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1003)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1003)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC005876.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: b Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19913434.
FEATURES Location/Qualifiers
source 1..1003
/db_xref="H-InvDB:HIT000032493"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4498 IMAGE:2964510"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1003
/gene="ATP6V0B"
/gene_synonym="HATPL"
/gene_synonym="VMA16"
/db_xref="GeneID:533"
/db_xref="HGNC:HGNC:861"
/db_xref="MIM:603717"
CDS 65..682
/gene="ATP6V0B"
/gene_synonym="HATPL"
/gene_synonym="VMA16"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 21kDa, V0
subunit b"
/protein_id="AAH05876.1"
/db_xref="GeneID:533"
/db_xref="HGNC:HGNC:861"
/db_xref="MIM:603717"
/translation="MTGLALLYSGVFVAFWACALAVGVCYTIFDLGFRFDVAWFLTET
SPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAI
YGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS
GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSRVKMGD"
BASE COUNT 183 a 283 c 279 g 258 t
ORIGIN
1 gtggacgctg ggacgcgttt gtagctccgg ccccgccgtt ccgacccccg ccgccgtcgc
61 cgccatgacg gggctagcac tgctctactc cggggtcttc gtggccttct gggcctgcgc
121 gctggccgtg ggagtctgct acaccatttt tgatttgggc ttccgctttg atgtggcatg
181 gttcctgacg gagacttcgc ccttcatgtg gtccaacctg ggcattggcc tagctatctc
241 cctgtctgtg gttggggcag cctggggcat ctatattacc ggctcctcca tcattggtgg
301 aggagtgaag gcccccagga tcaagaccaa gaacctggtc agcatcatct tctgtgaggc
361 tgtggccatc tacggcatca tcatggcaat tgtcattagc aacatggctg agcctttcag
421 tgccacagac cccaaggcca tcggccatcg gaactaccat gcaggctact ccatgtttgg
481 ggctggcctc accgtaggcc tgtctaacct cttctgtgga gtctgcgtgg gcatcgtggg
541 cagtggggct gccctggccg atgctcagaa ccccagcctc tttgtaaaga ttctcatcgt
601 ggagatcttt ggcagcgcca ttggcctctt tggggtcatc gtcgcaattc ttcagacctc
661 cagagtgaag atgggtgact agatgatatg tgtgggtggg gccgtgcctc acttttattt
721 attgctggtt ttcctgggac agctggagct gtgtccctta gcctttcaga ggcttggtgt
781 tcagggccct ccctgcactc ccctcttgct gcgtgttgat ttggaggcac tgcagtccag
841 gccgagtcct cagtgcgggg agcaggctgc tgctgctgac tctgtgcagc tgcgcacctg
901 tgtcccccac ctccaccctc aacccatctt cctagtgttt gtgaaataaa cttggtattt
961 gtctgggtca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//