LOCUS BC005840 1196 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens selenoprotein S, mRNA (cDNA clone MGC:2553
IMAGE:2967406), complete cds.
ACCESSION BC005840
VERSION BC005840.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1196)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1196)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC005840.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: e Column: 17.
FEATURES Location/Qualifiers
source 1..1196
/db_xref="H-InvDB:HIT000032471"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2553 IMAGE:2967406"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1196
/gene="SELS"
/gene_synonym="AD-015"
/gene_synonym="ADO15"
/gene_synonym="MGC2553"
/gene_synonym="SBBI8"
/gene_synonym="SEPS1"
/gene_synonym="VIMP"
/db_xref="GeneID:55829"
/db_xref="MIM:607918"
CDS 27..596
/gene="SELS"
/gene_synonym="AD-015"
/gene_synonym="ADO15"
/gene_synonym="MGC2553"
/gene_synonym="SBBI8"
/gene_synonym="SEPS1"
/gene_synonym="VIMP"
/codon_start=1
/transl_except=(pos:588..590,aa:Sec)
/product="selenoprotein S"
/protein_id="AAH05840.2"
/db_xref="GeneID:55829"
/db_xref="MIM:607918"
/translation="MERQEESLSARPALETEGLRFLHTTVGSLLATYGWYIVFSCILL
YVVFQKLSARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKE
KLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVLKRKSDRKPLRG
GGYNPLSGEGGGACSWRPGRRGPSSGGUG"
BASE COUNT 343 a 238 c 310 g 305 t
ORIGIN
1 gctgggcggc ggcggcggcg gcggtcatgg aacgccaaga ggagtctctg tccgcgcggc
61 cggccctgga gaccgagggg ctgcgcttcc tgcacaccac ggtgggctcc ctgctggcca
121 cctatggctg gtacatcgtc ttcagctgca tccttctcta cgtggtcttt cagaagcttt
181 ccgcccggct aagagccttg aggcagaggc agctggaccg agctgcggct gctgtggaac
241 ctgatgttgt tgttaaacga caagaagctt tagcagctgc tcgactgaaa atgcaagaag
301 aactaaatgc gcaagttgaa aagcataagg aaaaactgaa acaacttgaa gaagaaaaaa
361 ggagacagaa gattgaaatg tgggacagca tgcaagaagg aaaaagttac aaaggaaatg
421 caaagaagcc ccaggaggaa gacagtcctg ggccttccac ttcatctgtc ctgaaacgga
481 aatcggacag aaagcctttg cggggaggag gttataaccc gttgtctggt gaaggaggcg
541 gagcttgctc ctggagacct ggacgcagag gcccgtcatc tggcggatga ggctaagaat
601 cttgttagtg tcacttttga cattagcaag atgaaccctt aaccctcgat tcaattgcct
661 tacgcacgct tttcacagtg actagccaag gggaggtggg gttgatttct gttcctaact
721 acacctgcat atgtcagggc tccagtcagc aaaaggtata gatgttgcct ctaggcatga
781 ggtcattggt cacattctac ttggagacag tgattgcatt cattgatttc atggttaatt
841 gctagttggt aggtaaaggc ctctagatga ttagcaatct tgataaaaga ggcctagtaa
901 tgttcttttg aggttagaaa tccttgctgc taggacagtc tctgtgacag gttgcgttga
961 atgatgtctt ccttatcaat ggtgagccca ccagtgagga ttactgatgt ggacagttga
1021 tggggtttgt ttctgtatat ttatttttat gtacagaact ttgtaaaaac gaaactattt
1081 aaaaaacaag aataacattt ttagcatctt tattcaagga gatttatgga cttcaatttg
1141 tctatcaaac attaaatagc tttttattac aaaaaaaaaa aaaaaaaaaa aaaaaa
//