LOCUS BC005838 1663 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tubulin, beta, mRNA (cDNA clone MGC:2440
IMAGE:2820585), complete cds.
ACCESSION BC005838
VERSION BC005838.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1663)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1663)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC005838.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: m Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222261.
FEATURES Location/Qualifiers
source 1..1663
/db_xref="H-InvDB:HIT000032469_09"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2440 IMAGE:2820585"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1663
/gene="TUBB"
/gene_synonym="M40"
/gene_synonym="MGC16435"
/gene_synonym="OK/SW-cl.56"
/gene_synonym="TUBB1"
/gene_synonym="TUBB5"
/db_xref="GeneID:203068"
/db_xref="HGNC:HGNC:20778"
/db_xref="MIM:191130"
CDS 132..1466
/gene="TUBB"
/gene_synonym="M40"
/gene_synonym="MGC16435"
/gene_synonym="OK/SW-cl.56"
/gene_synonym="TUBB1"
/gene_synonym="TUBB5"
/codon_start=1
/product="tubulin, beta"
/protein_id="AAH05838.1"
/db_xref="GeneID:203068"
/db_xref="HGNC:HGNC:20778"
/db_xref="MIM:191130"
/translation="MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL
DRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA
KGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP
DRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLT
TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR
GSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQ
NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRK
AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEEA"
BASE COUNT 389 a 476 c 418 g 380 t
ORIGIN
1 gtttgcacct cgctgctcca gcctctgggg cgcattccaa ccttccagcc tgcgacctgc
61 ggagaaaaaa aattacttat tttcttgccc catacatacc ttgaggcgag caaaaaaatt
121 aaattttaac catgagggaa atcgtgcaca tccaggctgg tcagtgtggc aaccagatcg
181 gtgccaagtt ctgggaggtg atcagtgatg aacatggcat cgaccccacc ggcacctacc
241 acggggacag cgacctgcag ctggaccgca tctctgtgta ctacaatgaa gccacaggtg
301 gcaaatatgt tcctcgtgcc atcctggtgg atctagaacc tgggaccatg gactctgttc
361 gctcaggtcc ttttggccag atctttagac cagacaactt tgtatttggt cagtctgggg
421 caggtaacaa ctgggccaaa ggccactaca cagagggcgc cgagctggtt gattctgtcc
481 tggatgtggt acggaaggag gcagagagct gtgactgcct gcagggcttc cagctgaccc
541 actcactggg cgggggcaca ggctctggaa tgggcactct ccttatcagc aagatccgag
601 aagaataccc tgatcgcatc atgaatacct tcagtgtggt gccttcaccc aaagtgtctg
661 acaccgtggt cgagccctac aatgccaccc tctccgtcca tcagttggta gagaatactg
721 atgagaccta ttgcattgac aacgaggccc tctatgatat ctgcttccgc actctgaagc
781 tgaccacacc aacctacggg gatctgaacc accttgtctc agccaccatg agtggtgtca
841 ccacctgcct ccgtttccct ggccagctca atgctgacct ccgcaagttg gcagtcaaca
901 tggtcccctt cccacgtctc catttcttta tgcctggctt tgcccctctc accagccgtg
961 gaagccagca gtatcgagct ctcacagtgc cggaactcac ccagcaggtc ttcgatgcca
1021 agaacatgat ggctgcctgt gacccccgcc acggccgata cctcaccgtg gctgctgtct
1081 tccgtggtcg gatgtccatg aaggaggtcg atgagcagat gcttaacgtg cagaacaaga
1141 acagcagcta ctttgtggaa tggatcccca acaatgtcaa gacagccgtc tgtgacatcc
1201 cacctcgtgg cctcaagatg gcagtcacct tcattggcaa tagcacagcc atccaggagc
1261 tcttcaagcg catctcggag cagttcactg ccatgttccg ccggaaggcc ttcctccact
1321 ggtacacagg cgagggcatg gacgagatgg agttcaccga ggctgagagc aacatgaacg
1381 acctcgtctc tgagtatcag cagtaccagg atgccaccgc agaagaggag gaggatttcg
1441 gtgaggaggc cgaagaggag gcctaaggca gagcccccat cacctcaggc ttctcagttc
1501 ccttagccgt cttactcaac tgcccctttc ctctccctca gaatttgtgt ttgctgcctc
1561 tatcttgttt tttgtttttt cttctggggg gggtctagaa cagtgcctgg cacatagtag
1621 gcgctcaata aatacttgtt tgttgaaaaa aaaaaaaaaa aaa
//