LOCUS       BC005404                2952 bp    mRNA    linear   HUM 08-OCT-2003
DEFINITION  Homo sapiens Sec23 homolog B (S. cerevisiae), mRNA (cDNA clone
            MGC:5020 IMAGE:3460841), complete cds.
ACCESSION   BC005404
VERSION     BC005404.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2952)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2952)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 4 Row: b Column: 2
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 16905502.
FEATURES             Location/Qualifiers
     source          1..2952
                     /db_xref="H-InvDB:HIT000032444"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:5020 IMAGE:3460841"
                     /tissue_type="Cervix, carcinoma"
                     /clone_lib="NIH_MGC_12"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2952
                     /gene="SEC23B"
                     /db_xref="GeneID:10483"
     CDS             251..2554
                     /gene="SEC23B"
                     /codon_start=1
                     /product="SEC23B protein"
                     /protein_id="AAH05404.1"
                     /db_xref="GeneID:10483"
                     /translation="MATYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPLACLLTP
                     LKERPDLPPVQYEPVLCSRPTCKAVLNPLCQVDYRAKLWACNFCFQRNQFPPAYGGIS
                     EVNQPAELMPQFSTIEYVIQRGAQSPLIFLYVVDTCLEEDDLQALKESLQMSLSLLPP
                     DALVGLITFGRMVQVHELSCEGISKSYVFRGTKDLTAKQIQDMLGLTKPAMPMQQARP
                     AQPQEHPFASSRFLQPVHKIDMNLTDLLGELQRDPWPVTQGKRPLRSTGVALSIAVGL
                     LEGTFPNTGARIMLFTGGPPTQGPGMVVGDELKIPIRSWHDIEKDNARFMKKATKHYE
                     MLANRTAANGHCIDIYACALDQTGLLEMKCCANLTGGYVVMGDSFNTSLFKQTFQRIF
                     TKDFNGDFRMAFGATLDVKTSRELKIAGAIGPCVSLNVKGLCVSENELGVGGTSQWKI
                     CGLDPTSTLGIYFEVVNQHNTPIPQGGRGAIQFVTHYQHSSTQRRIRVTTIARNWADV
                     QSQLRHIEAAFDQEAAAVLMARLGVFRAESEEGPDVLRWLDRQLIRLCQKFGQYNKED
                     PTSFRLSDSFSLYPQFMFHLRRSPFLQVFNNSPDESSYYRHHFARQDLTQSLIMIQPI
                     LYSYSFHGPPEPVLLDSSSILADRILLMDTFFQIVIYLGETIAQWRKAGYQDMPEYEN
                     FKHLLQAPLDDAQEILQARFPMPRYINTEHGGSQARFLLSKVNPSQTHNNLYAWGQET
                     GAPILTDDVSLQVFMDHLKKLAVSSAC"
     misc_feature    266..2542
                     /gene="SEC23B"
                     /note="Sec23_Sec24; Region: Sec23/Sec24 family.
                     COPII-coated vesicles carry proteins from the endoplasmic
                     reticulum to the Golgi complex. This vesicular transport
                     can be reconstituted by using three cytosolic components
                     containing five proteins: the small GTPase Sar1p, the
                     Sec23p/24p complex, and the Sec13p/Sec31p complex. The
                     three-dimensional reconstruction of Sec23p/24p reveals
                     that it has a bone-shaped structure, (17 nm in length),
                     composed of two similar globular domains, one
                     corresponding to Sec23p and the other to Sec24p"
                     /db_xref="CDD:pfam04105"
BASE COUNT          782 a          668 c          690 g          812 t
ORIGIN      
        1 gcttctggga ggaggccttt tcttgacagt ttagggtagc gggggaatcg atgatccggg
       61 agtcccctgc ggatgtcgtc ccgcaccagg ccgggaccga tttctggctc cagtttcccc
      121 agaattgcgg actgcgcaca cctggaagga cccaagtccc gttttatagt tgagaaactc
      181 aagactcaga caagtgaaac gacttttgct tcatgacagc tggaactgga acccagttcc
      241 cttttagact atggcgacat acctggagtt catccagcag aatgaagaac gggatggtgt
      301 gcgttttagt tggaacgtgt ggccttccag ccggctggag gctacaagaa tggttgtacc
      361 cctggcttgt ctccttactc ctttgaaaga acgtccagac ctacctcctg tacaatatga
      421 acctgtgctt tgcagcaggc caacttgtaa agctgttctc aacccacttt gtcaggttga
      481 ttatcgagca aaactttggg cctgtaattt ctgttttcaa agaaatcagt ttcctccagc
      541 ttatggaggc atatctgagg tgaatcaacc tgccgaattg atgccccagt tttctacaat
      601 tgagtacgtg atacagcgag gtgctcagtc ccctctgatc tttctctatg tggttgacac
      661 atgcctggag gaagatgacc ttcaagcact caaagagtcc ctgcagatgt ccctgagtct
      721 tcttcctcca gatgctctgg tgggtctgat cacatttgga aggatggtgc aggttcatga
      781 gctaagctgt gaaggaatct ccaaaagtta tgtcttccga gggaccaagg atttaactgc
      841 aaagcaaata caggatatgt tgggcctgac caagccagcc atgcccatgc agcaagcacg
      901 acctgcacaa ccacaggagc acccttttgc ttcaagcaga tttctgcagc ctgttcacaa
      961 gattgatatg aacctcactg atcttcttgg ggagctacag agggacccat ggccagtaac
     1021 tcaggggaag agacctttgc gatccactgg tgtggctttg tccattgctg ttggcttgct
     1081 ggagggcact tttccaaaca caggagccag gatcatgctg tttactggag gtccccctac
     1141 ccaagggcct ggcatggtgg ttggagatga attaaagatt cctattcgtt cttggcatga
     1201 tattgagaaa gataatgcac gattcatgaa aaaggcaacc aagcactatg agatgcttgc
     1261 taatcgaaca gctgcaaatg gtcactgcat tgatatttat gcttgtgccc ttgatcaaac
     1321 tggacttttg gagatgaagt gttgtgcaaa tcttactgga ggctacgtgg taatgggaga
     1381 ttctttcaac acttctctct tcaagcagac attccaaaga atctttacta aagattttaa
     1441 tggagatttc cgaatggcat ttggtgctac tttggacgta aagacctctc gggaactgaa
     1501 gattgcagga gccattggtc catgcgtatc tctgaatgtg aaaggactgt gtgtgtcaga
     1561 aaatgagctt ggtgttggtg gcacgagtca gtggaaaatc tgtggcctag atcctacatc
     1621 tacacttggc atctattttg aagttgtcaa tcagcacaac accccgatcc cccaaggagg
     1681 cagaggagcc atccagtttg tcacgcatta tcagcactcc agcacccaga gacgcatccg
     1741 cgtgaccacc atcgcccgaa attgggcaga tgtacagagt cagctcaggc acatagaagc
     1801 agcatttgac caggaggctg cggcagtgtt gatggcacgg cttggggtgt tccgagcgga
     1861 gtcagaggag gggcccgatg tgctccggtg gctggaccga caactcatcc gactgtgtca
     1921 aaagtttgga cagtataaca aagaagaccc cacttctttt aggttatcag attccttttc
     1981 tctatatcct cagtttatgt tccatctgag aagatctcca tttcttcaag tgtttaacaa
     2041 cagtcctgat gagtcgtcat attacagaca tcattttgcc cggcaggacc tgacccagtc
     2101 cctcatcatg atccagccca ttctctactc ttactccttt catgggccac cagagccagt
     2161 actcttggat agcagcagca ttctagctga cagaattttg ctgatggata ctttctttca
     2221 aattgtcatt tatcttggtg agaccatagc ccagtggcgt aaagctggct accaggacat
     2281 gcccgagtat gaaaacttca agcaccttct gcaggcacca ctggatgatg ctcaagaaat
     2341 tctgcaagca cgcttcccga tgccacgtta catcaacacg gagcatggag gcagtcaggc
     2401 tcgattcctt ttgtccaaag tgaacccatc tcagacacac aataacctgt atgcttgggg
     2461 acaggaaact ggagcaccca tcctaactga tgatgttagc ctgcaggtgt tcatggacca
     2521 tttgaagaag ctggctgtct ccagtgcctg ttaagctgag gatacaacca ggaaatgcaa
     2581 cggtgtcaga ttgtgttcaa aatgtctaga aaggcttgat aacattcctg ttacttttct
     2641 agcagatttt aacaaataat caaggacatt ttatatgtaa ctctttagat tataatttat
     2701 ttgtattcct gtctttgtcc tttttcttgc actataaaat tataaggtca taaatgtttt
     2761 ggtacttgta gatgtttatg tgctttttgt atcctaactt ttagaatcta aataaaatca
     2821 gaggtaatgt attttggcag cttgtttagg tgagaatctt aatgatcata aaaggaaata
     2881 aatctagatg cagaaagtac tggctaaaat attgctaata caaatgtgat ttcctgaaaa
     2941 aaaaaaaaaa aa
//