LOCUS BC005400 1710 bp mRNA linear HUM 23-JUN-2006
DEFINITION Homo sapiens centromere protein K, mRNA (cDNA clone MGC:12540
IMAGE:3839409), complete cds.
ACCESSION BC005400
VERSION BC005400.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1710)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1710)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: j Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16905072.
FEATURES Location/Qualifiers
source 1..1710
/db_xref="H-InvDB:HIT000032442"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12540 IMAGE:3839409"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1710
/gene="CENPK"
/gene_synonym="AF5alpha"
/gene_synonym="CENP-K"
/gene_synonym="FKSG14"
/gene_synonym="P33"
/gene_synonym="Solt"
/db_xref="GeneID:64105"
/db_xref="HGNC:HGNC:29479"
CDS 169..978
/gene="CENPK"
/gene_synonym="AF5alpha"
/gene_synonym="CENP-K"
/gene_synonym="FKSG14"
/gene_synonym="P33"
/gene_synonym="Solt"
/codon_start=1
/product="CENPK protein"
/protein_id="AAH05400.1"
/db_xref="GeneID:64105"
/db_xref="HGNC:HGNC:29479"
/translation="MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSL
IGTETLTDSNAQLSLLIMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQ
DLEMVLSTKESKNEKLKEDLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFN
ELKTKMLNIKEYKEKLLSTLGEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEI
LINRLFDVPHDPYVKISDSFWPPYVELLLRNGIALRHPEDPTRIRLEAFHQ"
BASE COUNT 614 a 245 c 300 g 551 t
ORIGIN
1 ggggctggca agcgcttcct gcgcagcgcc gaggcgacct ggagtttgtg acgctgtgat
61 ggtctagagg ctggagattc aagatctggg tgccatcatt ttctggttct gttgatgacc
121 ctcttccagt ttttcttata aggctaaaaa ttcacaaagc atatatcaat gaatcaggag
181 gatctagatc cggatagtac tacagatgtg ggagatgtta caaatactga agaagaactt
241 attagagaat gtgaagaaat gtggaaagat atggaagaat gtcagaataa attatcactt
301 attggaactg aaacactcac cgattcaaat gctcagctat cattgttaat tatgcaagta
361 aaatgtttaa ccgctgaact cagtcaatgg cagaaaaaaa cacctgaaac aattcccttg
421 actgaagacg ttctcataac attaggaaaa gaagagttcc aaaagctgag acaagatctt
481 gaaatggtac tgtccactaa ggagtcaaag aatgaaaagt taaaggaaga cttagaaagg
541 gaacaacggt ggttggatga acagcaacag ataatggaat ctcttaatgt actacacagt
601 gaattgaaaa ataaggttga aacattttct gaatcaagaa tctttaatga actgaaaact
661 aaaatgctta atataaaaga atataaggag aaactcttga gtaccttggg cgagtttcta
721 gaagaccatt ttcctctgcc tgatagaagt gttaaaaaga aaaagaaaaa cattcaagaa
781 tcatctgtaa acctgataac actgcatgaa atgttagaga ttcttataaa tagattattt
841 gatgttccac atgatccata tgtcaaaatt agtgattcct tttggccacc ttatgttgag
901 ctgctgctgc gtaatggaat tgccttgaga catccagaag atccaacccg aataagatta
961 gaagctttcc atcagtaaaa ggatgttttc ttttttcaca cagtaaaaat tcttatcatt
1021 caaggatatt ggaaccacag gactatttgg ataaaaaaca ttatttgcaa attaatgcgc
1081 atagtacttt tattgcaaaa tggcatgtgc tgccatctat tattcatttt taaatggtca
1141 tttcttattc agtgagtgct ttagtgtttt aaactatatg gataagaatg caggtagata
1201 atattctagg cataaaacat ttaatgtacc ttacctcatg caatattctt tggattcttt
1261 gttgatttat gatattgcta atataatatt ttcttaaaat atataacaat atcttttatg
1321 cattttgagt tccagctggt gcttctttat atttagaaat tataatggga aggccattta
1381 atttacagat ggttttaaaa ttgaggtaat atctgaggtg gcataattta aaaatattta
1441 gcaaatttgt ttcatatata ctgtcttatt tctagatttg tttaaaattg gaatatgaaa
1501 aactaatgga taaagctagc ataaaattga tattttagtt tgtattatta atatatcatg
1561 ttaccttata tattaatcta ctcttgattc tgctaattat taccaacaaa attgtattca
1621 tgacatttta ttaatcctct gtgaattttc tgtaaataaa attatttctg aaaatctctc
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//