LOCUS BC005390 1595 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase,
6, mRNA (cDNA clone MGC:12520 IMAGE:3996906), complete cds.
ACCESSION BC005390
VERSION BC005390.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1595)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1595)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: l Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24430159.
FEATURES Location/Qualifiers
source 1..1595
/db_xref="H-InvDB:HIT000032433"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12520 IMAGE:3996906"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1595
/gene="PSMC6"
/gene_synonym="CADP44"
/gene_synonym="MGC12520"
/gene_synonym="p42"
/gene_synonym="P44"
/gene_synonym="SUG2"
/db_xref="GeneID:5706"
/db_xref="HGNC:HGNC:9553"
/db_xref="MIM:602708"
CDS 21..1190
/gene="PSMC6"
/gene_synonym="CADP44"
/gene_synonym="MGC12520"
/gene_synonym="p42"
/gene_synonym="P44"
/gene_synonym="SUG2"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
ATPase, 6"
/protein_id="AAH05390.1"
/db_xref="GeneID:5706"
/db_xref="HGNC:HGNC:9553"
/db_xref="MIM:602708"
/translation="MADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSE
NDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDM
TTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQ
RVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREM
FNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMI
MATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKL
SDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV"
BASE COUNT 543 a 232 c 361 g 459 t
ORIGIN
1 atgagagacg gcttctcatc atggcggacc ctagagataa ggcgcttcag gactaccgca
61 agaagttgct tgaacacaag gagatcgacg gccgtcttaa ggagttaagg gaacaattaa
121 aagaacttac caagcagtat gaaaagtctg aaaatgatct gaaggcccta cagagtgttg
181 ggcagatcgt gggtgaagtg cttaaacagt taactgaaga aaaattcatt gttaaagcta
241 ccaatggacc aagatatgtt gtgggttgtc gtcgacagct tgacaaaagt aagctgaagc
301 caggaacaag agttgctttg gatatgacta cactaactat catgagatat ttgccgagag
361 aggtggatcc actggtttat aacatgtctc atgaggaccc tgggaatgtt tcttattctg
421 agattggagg gctatcagaa cagatccggg aattaagaga ggtgatagaa ttacctctta
481 caaacccaga gttatttcag cgtgtaggaa taatacctcc aaaaggctgt ttgttatatg
541 gaccaccagg tacgggaaaa acactcttgg cacgagccgt tgctagccag ctggactgca
601 atttcttaaa ggttgtatct agttctattg tagacaagta cattggtgaa agtgctcgtt
661 tgatcagaga aatgtttaat tatgctagag atcatcaacc atgcatcatt tttatggatg
721 aaatagatgc tattggtggt cgtcggtttt ctgagggtac ttcagctgac agagagattc
781 agagaacgtt aatggagtta ctgaatcaaa tggatggatt tgatactctg catagagtta
841 aaatgatcat ggctacaaac agaccagata cactggatcc tgctttgctg cgtccaggaa
901 gattagatag aaaaatacat attgatttgc caaatgaaca agcaagatta gacatactga
961 aaatccatgc aggtcccatt acaaagcatg gtgaaataga ttatgaagca attgtgaagc
1021 tttcggatgg ctttaatgga gcagatctga gaaatgtttg tactgaagca ggtatgttcg
1081 caattcgtgc tgatcatgat tttgtagtac aggaagactt catgaaagca gtcagaaaag
1141 tggctgattc taagaagctg gagtctaaat tggactacaa acctgtgtaa tttactgtaa
1201 gatttttgat ggctgcatga cagatgttgg cttattgtaa aaataaagtt aaagaaaata
1261 atgtatgtat tggcaatgat gtcattaaaa gtatatgaat aaaaatatga gtaacatcat
1321 aaaaattagt aattcaactt ttaagataca gaagaaattt gtatgtttgt taaagttgca
1381 tttattgcag caagttacaa agggaaagtg ttgaagcttt tcatatttgc tgcgtgagca
1441 ttttgtaaaa tattgaaagt ggtttgagat agtggtataa gaaagcattt cttatgactt
1501 attttgtatc atttgttttc ctcatctaaa aagttgaata aaatctgttt gattcagttc
1561 tcctacgaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//