LOCUS BC005380 926 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens apolipoprotein A-I, mRNA (cDNA clone MGC:12499 IMAGE:3934992), complete cds. ACCESSION BC005380 VERSION BC005380.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 926) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 926) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 16 Row: l Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4557320. FEATURES Location/Qualifiers source 1..926 /db_xref="H-InvDB:HIT000032425_03" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12499 IMAGE:3934992" /tissue_type="Skeletal Muscle" /clone_lib="NIH_MGC_81" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..926 /gene="APOA1" /db_xref="GeneID:335" /db_xref="HGNC:HGNC:600" /db_xref="MIM:107680" CDS 39..842 /gene="APOA1" /codon_start=1 /product="apolipoprotein A-I" /protein_id="AAH05380.1" /db_xref="GeneID:335" /db_xref="HGNC:HGNC:600" /db_xref="MIM:107680" /translation="MKAAVLTLAVLFLTGSQARHFWQQDEPPQSPWDRVKDLATVYVD VLKDSGRDYVSQFEGSALGKQLNLKLLDNWDSVTSTFSKLREQLGPVTQEFWDNLEKE TEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEMELYRQKVEPLRAELQEGARQKLHE LQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGGARLAEYHA KATEHLSTLSEKAKPALEDLRQGLLPVLESFKVSFLSALEEYTKKLNTQ" BASE COUNT 232 a 276 c 290 g 128 t ORIGIN 1 agagactgcg agaaggaggt cccccacggc ccttcaggat gaaagctgcg gtgctgacct 61 tggccgtgct cttcctgacg gggagccagg ctcggcattt ctggcagcaa gatgaacccc 121 cccagagccc ctgggatcga gtgaaggacc tggccactgt gtacgtggat gtgctcaaag 181 acagcggcag agactatgtg tcccagtttg aaggctccgc cttgggaaaa cagctaaacc 241 taaagctcct tgacaactgg gacagcgtga cctccacctt cagcaagctg cgcgaacagc 301 tcggccctgt gacccaggag ttctgggata acctggaaaa ggagacagag ggcctgaggc 361 aggagatgag caaggatctg gaggaggtga aggccaaggt gcagccctac ctggacgact 421 tccagaagaa gtggcaggag gagatggagc tctaccgcca gaaggtggag ccgctgcgcg 481 cagagctcca agagggcgcg cgccagaagc tgcacgagct gcaagagaag ctgagcccac 541 tgggcgagga gatgcgcgac cgcgcgcgcg cccatgtgga cgcgctgcgc acgcatctgg 601 ccccctacag cgacgagctg cgccagcgct tggccgcgcg ccttgaggct ctcaaggaga 661 acggcggcgc cagactggcc gagtaccacg ccaaggccac cgagcatctg agcacgctca 721 gcgagaaggc caagcccgcg ctcgaggacc tccgccaagg cctgctgccc gtgctggaga 781 gcttcaaggt cagcttcctg agcgctctcg aggagtacac taagaagctc aacacccagt 841 gaggcgcccg ccgccgcccc ccttcccggt gctcagaata aacgtttcca aagtgcgaaa 901 aaaaaaaaaa aaaaaaaaaa aaaaaa //