LOCUS BC005350 770 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens regenerating islet-derived 1 alpha, mRNA (cDNA clone
MGC:12447 IMAGE:3950349), complete cds.
ACCESSION BC005350
VERSION BC005350.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 770)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 770)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC005350.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: o Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30181229.
FEATURES Location/Qualifiers
source 1..770
/db_xref="H-InvDB:HIT000032400"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12447 IMAGE:3950349"
/tissue_type="Pancreas"
/clone_lib="NIH_MGC_78"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..770
/gene="REG1A"
/gene_synonym="ICRF"
/gene_synonym="P19"
/gene_synonym="PSP"
/gene_synonym="PSPS"
/gene_synonym="PSPS1"
/gene_synonym="PTP"
/db_xref="GeneID:5967"
/db_xref="HGNC:HGNC:9951"
/db_xref="MIM:167770"
CDS 48..548
/gene="REG1A"
/gene_synonym="ICRF"
/gene_synonym="P19"
/gene_synonym="PSP"
/gene_synonym="PSPS"
/gene_synonym="PSPS1"
/gene_synonym="PTP"
/codon_start=1
/product="regenerating islet-derived 1 alpha"
/protein_id="AAH05350.1"
/db_xref="GeneID:5967"
/db_xref="HGNC:HGNC:9951"
/db_xref="MIM:167770"
/translation="MAQTSSYFMLISCLMFLSQSQGQEAQTELPQARISCPEGTNAYR
SYCYYFNEDRETWVDADLYCQNMNSGNLVSVLTQAEGAFVASLIKESGTDDFNVWIGL
HDPKKNRRWHWSSGSLVSYKSWGIGAPSSVNPGYCVSLTSSTGFQKWKDVPCEDKFSF
VCKFKN"
BASE COUNT 221 a 196 c 168 g 185 t
ORIGIN
1 gagattgttg atttgcctct taagcaagag attcattgca gctcagcatg gctcagacca
61 gctcatactt catgctgatc tcctgcctga tgtttctgtc tcagagccaa ggccaagagg
121 cccagacaga gttgccccag gcccggatca gctgcccaga aggcaccaat gcctatcgct
181 cctactgcta ctactttaat gaagaccgtg agacctgggt tgatgcagat ctctattgcc
241 agaacatgaa ttcgggcaac ctggtgtctg tgctcaccca ggccgagggt gcctttgtgg
301 cctcactgat taaggagagt ggcactgatg acttcaatgt ctggattggc ctccatgacc
361 ccaaaaagaa ccgccgctgg cactggagca gtgggtccct ggtctcctac aagtcctggg
421 gcattggagc cccaagcagt gttaatcctg gctactgtgt gagcctgacc tcaagcacag
481 gattccagaa atggaaggat gtgccttgtg aagacaagtt ctcctttgtc tgcaagttca
541 aaaactagag gcagctggaa aatacatgtc tagaactgat ccagcaatta caacggagtc
601 aaaaattaaa ccggaccatc tctccaactc aactcaacct ggacactctc ttctctgctg
661 agtttgcctt gttaatcttc aatagtttta cctaccccag tctttggaac cctaaataat
721 aaaaataaac atgtttccac gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//