LOCUS BC005349 1210 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens secretogranin V (7B2 protein), mRNA (cDNA clone
MGC:12446 IMAGE:3949961), complete cds.
ACCESSION BC005349
VERSION BC005349.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1210)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1210)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: k Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506916.
FEATURES Location/Qualifiers
source 1..1210
/db_xref="H-InvDB:HIT000032399"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12446 IMAGE:3949961"
/tissue_type="Pancreas"
/clone_lib="NIH_MGC_78"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1210
/gene="SCG5"
/gene_synonym="7B2"
/gene_synonym="P7B2"
/gene_synonym="SgV"
/db_xref="GeneID:6447"
/db_xref="HGNC:HGNC:10816"
/db_xref="MIM:173120"
CDS 57..695
/gene="SCG5"
/gene_synonym="7B2"
/gene_synonym="P7B2"
/gene_synonym="SgV"
/codon_start=1
/product="secretogranin V (7B2 protein)"
/protein_id="AAH05349.1"
/db_xref="GeneID:6447"
/db_xref="HGNC:HGNC:10816"
/db_xref="MIM:173120"
/translation="MVSRMVSTMLSGLLFWLASGWTPAFAYSPRTPDRVSEADIQRLL
HGVMEQLGIARPRVEYPAHQAMNLVGPQSIEGGAHEGLQHLGPFGNIPNIVAELTGDN
IPKDFSEDQGYPDPPNPCPVGKTADDGCLENTPDTAEFSREFQLHQHLSDPEHDYPGL
GKWNKKLLYEKMKGGERRKRRSVNPYLQGQRLDNVVAKKSVPHFSDEDKDPE"
BASE COUNT 362 a 255 c 287 g 306 t
ORIGIN
1 gacccccacc aaggcccata ccgcagtagg ctcctcgggc tgcccctcgg ttgacaatgg
61 tctccaggat ggtctctacc atgctatctg gcctactgtt ttggctggca tctggatgga
121 ctccagcatt tgcttacagc ccccggaccc ctgaccgggt ctcagaagca gatatccaga
181 ggctgcttca tggtgttatg gagcaattgg gcattgccag gccccgagtg gaatatccag
241 ctcaccaggc catgaatctt gtgggccccc agagcattga aggtggagct catgaaggac
301 ttcagcattt gggtcctttt ggcaacatcc ccaacatcgt ggcagagttg actggagaca
361 acattcctaa ggactttagt gaggatcagg ggtacccaga ccctccaaat ccctgtcctg
421 ttggaaaaac agcagatgat ggatgtctag aaaacacccc tgacactgca gagttcagtc
481 gagagttcca gttgcaccag catctctctg atccggaaca tgactatcca ggcttgggca
541 agtggaacaa gaaactcctt tacgagaaga tgaagggagg agagagacga aagcggagga
601 gtgtcaatcc atatctacaa ggacagagac tggataatgt tgttgcaaag aagtctgtcc
661 cccatttttc agatgaggat aaggatccag agtaaagaga agatgctaga cgaaaaccca
721 cattacctgt taggcctcag catggcttat gtgcacgtgt aaatggagtc cctgtgaatg
781 acagcatgtt tcttacatag ataattatgg atacaaagca gctgtatgta gatagtgtat
841 tgtcttcaca ccgatgattc tgctttttgc taaattagaa taagagcttt tttgtttctt
901 gggtttttaa aatgtgaatc tgcaatgatc ataaaaatta aaatgtgaat gtcaacaata
961 aaaagcaaga ctatgaaagg ctcagatttc ttgcagttta aaatggtgtc tgaggttgta
1021 ctattttggc caagtctgta gaaagctgtc atttgatttt gattatgtag ttcatccagc
1081 ccttgggcat tgttatacac cagtaaagaa ggctgtactc aagaggagga gctgacacat
1141 ttcacttggc tgcgtcttaa taaacatgaa tgcaagcaca aaaaaaaaaa aaaaaaaaaa
1201 aaaaaaaaaa
//