LOCUS BC005338 1729 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens capping protein (actin filament) muscle Z-line, alpha
2, mRNA (cDNA clone MGC:12426 IMAGE:4041994), complete cds.
ACCESSION BC005338
VERSION BC005338.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1729)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1729)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: h Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41327721.
FEATURES Location/Qualifiers
source 1..1729
/db_xref="H-InvDB:HIT000032390"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12426 IMAGE:4041994"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_58"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1729
/gene="CAPZA2"
/gene_synonym="CAPPA2"
/gene_synonym="CAPZ"
/db_xref="GeneID:830"
/db_xref="HGNC:HGNC:1490"
/db_xref="MIM:601571"
CDS 58..918
/gene="CAPZA2"
/gene_synonym="CAPPA2"
/gene_synonym="CAPZ"
/codon_start=1
/product="capping protein (actin filament) muscle Z-line,
alpha 2"
/protein_id="AAH05338.1"
/db_xref="GeneID:830"
/db_xref="HGNC:HGNC:1490"
/db_xref="MIM:601571"
/translation="MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDN
LLREGAAHAFAQYNLDQFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLR
KEATDPRPCEVENAVESWRTSVETALRAYVKEHYPNGVCTVYGKKIDGQQTIIACIES
HQFQAKNFWNGRWRSEWKFTITPSTTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTV
SNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS
YKIGKEMQNA"
BASE COUNT 575 a 275 c 346 g 533 t
ORIGIN
1 ggggaagtca ggtggccgct gccgccgccg ccgccgcggt ttgtcgccag aaggaagatg
61 gcggatctgg aggagcagtt gtctgatgaa gagaaggtgc gtatagcagc aaaattcatc
121 attcatgccc ctcctggaga atttaatgag gttttcaatg atgttcggtt actgcttaat
181 aatgacaatc ttctcaggga aggagcagcc catgcatttg cacagtataa cttggaccag
241 tttactccag taaaaattga aggttatgaa gatcaggtat tgataacaga acatggcgac
301 ttgggaaatg gaaagttttt ggatccaaag aacagaatct gttttaaatt tgatcactta
361 aggaaggagg caactgatcc aagaccatgt gaagtagaaa atgcagttga atcatggaga
421 acttcagtag aaactgctct gagagcttac gtaaaagaac attacccgaa tggagtctgc
481 actgtgtatg gcaaaaaaat agatggacag caaaccatta ttgcatgcat agaaagccat
541 cagttccaag caaaaaattt ttggaatggt cgttggaggt cagaatggaa gtttacaatc
601 actccttcaa ccactcaagt ggttggcatc ttgaaaattc aggttcatta ttatgaagat
661 ggtaatgttc agctagtgag tcataaagat atacaagatt ccctaacagt gtctaatgaa
721 gtgcaaacag caaaagaatt tataaagatt gtagaagctg cagaaaatga ataccagact
781 gccatcagtg agaattatca gacaatgtcg gacactactt tcaaagcctt acgtcgacag
841 ttgccagtta cacgcactaa gattgattgg aacaagatcc ttagctacaa gattggcaaa
901 gagatgcaga atgcataaga tgaacattgc atgaccggat cattttagtg tctttgcgtt
961 aaaaaatcat tgcaaaagta ttctgaactg tcaagctgcc cagtcagatg ggctgttgcc
1021 atttaaaatc actgtaatta attagtttga ttagagcaca aagcttagct aatcaaccat
1081 tatttttcat tttgtttgtt ctaagaggat tgaaaatcag tttagtttaa atgtctttct
1141 gttaggcctt tctttcttac aatgaagaga tgattcttct agtttatggt taaaagtttt
1201 tgaagtgtct caaaaatatt ttactaactg taaccctaaa attgatgtct tttggtttat
1261 gaaatcagta atttttgata tttccccagt tctttttaat ggggtcaata atggacattc
1321 tagtttaagg tggttgatgg atttagccat atatgctgct aaagaaattg tctacctttt
1381 cttcctcacc tgttccattt atgtaaagtt gagattagag ggaaagcatt ttctatatca
1441 attgtgttta aacctttcaa gaaggttatt tagctagctt agtgttgaac taaatttttt
1501 ttaaacaagg caaggtctaa tgctgttttg agattctgaa attaatgaaa atacttattt
1561 cagaaatgca tttaatgctt tttttcttgt gacagttacg caaatcagct tgaattccat
1621 atgtccctga gttattttta tcataaagcc acaaatgtat tataacaagg caaattgtaa
1681 tatatataat cctgaactct aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//