LOCUS BC005292 1370 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-X-C motif) ligand 11, mRNA (cDNA clone
MGC:12356 IMAGE:3934139), complete cds.
ACCESSION BC005292
VERSION BC005292.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1370)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1370)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: j Column: 19.
FEATURES Location/Qualifiers
source 1..1370
/db_xref="H-InvDB:HIT000032351"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12356 IMAGE:3934139"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1370
/gene="CXCL11"
/gene_synonym="b-R1"
/gene_synonym="H174"
/gene_synonym="I-TAC"
/gene_synonym="IP-9"
/gene_synonym="IP9"
/db_xref="GeneID:6373"
/db_xref="HGNC:HGNC:10638"
/db_xref="MIM:604852"
CDS 61..345
/gene="CXCL11"
/gene_synonym="b-R1"
/gene_synonym="H174"
/gene_synonym="I-TAC"
/gene_synonym="IP-9"
/gene_synonym="IP9"
/codon_start=1
/product="chemokine (C-X-C motif) ligand 11"
/protein_id="AAH05292.1"
/db_xref="GeneID:6373"
/db_xref="HGNC:HGNC:10638"
/db_xref="MIM:604852"
/translation="MSVKGMAIALAVILCATVVQGFPMFKRGRCLCIGPGVKAVKVAD
IEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKKVERKNF"
BASE COUNT 495 a 224 c 243 g 408 t
ORIGIN
1 gaagagcagc aaagctgaag tagcagcaac agcaccagca gcaacagcaa aaaaacaaac
61 atgagtgtga agggcatggc tatagccttg gctgtgatat tgtgtgctac agttgttcaa
121 ggcttcccca tgttcaaaag aggacgctgt ctttgcatag gccctggggt aaaagcagtg
181 aaagtggcag atattgagaa agcctccata atgtacccaa gtaacaactg tgacaaaata
241 gaagtgatta ttaccctgaa agaaaataaa ggacaacgat gcctaaatcc caaatcgaag
301 caagcaaggc ttataatcaa aaaagttgaa agaaagaatt tttaaaaata tcaaaacata
361 tgaagtcctg gaaaagggca tctgaaaaac ctagaacaag tttaactgtg actactgaaa
421 tgacaagaat tctacagtag gaaactgaga cttttctatg gttttgtgac tttcaacttt
481 tgtacagtta tgtgaaggat gaaaggtggg tgaaaggacc aaaaacagaa atacagtctt
541 cctgaatgaa tgacaatcag aattccactg cccaaaggag tccaacaatt aaatggattt
601 ctaggaaaag ctaccttaag aaaggctggt taccatcgga gtttacaaag tgctttcacg
661 ttcttacttg ttgtattata cattcatgca tttctaggct agagaacctt ctagatttga
721 tgcttacaac tattctgttg tgactatgag aacatttctg tctctagaag ttatctgtct
781 gtattgatct ttatgctata ttactatctg tggttacagt ggagacattg acattattac
841 tggagtcaag cccttataag tcaaaagcat ctatgtgtcg taaagcattc ctcaaacatt
901 ttttcatgca aatacacact tctttcccca aatatcatgt agcacatcaa tatgtaggga
961 aacattctta tgcatcattt ggtttgtttt ataaccaatt cattaaatgt aattcataaa
1021 atgtactatg aaaaaaatta tatgctatgg gatactggca acagtgcaca tatttcataa
1081 ccaaattagc agcaccggtc ttaatttgat gtttttcaac ttttattcat tgagatgttt
1141 tgaagcaatt aggatatgtg tgtttactgt actttttgtt ttgatccgtt tgtataaatg
1201 atagcaatat cttggacaca tttgaaatac aaaatgtttt tgtctaccaa agaaaaatgt
1261 tgaaaaataa gcaaatgtat acctagcaat cacttttact ttttgtaatt ctgtctctta
1321 gaaaaataca taatctaacc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//