LOCUS BC005269 1691 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens phospholamban, mRNA (cDNA clone MGC:12311
IMAGE:3934199), complete cds.
ACCESSION BC005269
VERSION BC005269.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1691)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1691)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: p Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29171725.
FEATURES Location/Qualifiers
source 1..1691
/db_xref="H-InvDB:HIT000032336"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12311 IMAGE:3934199"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1691
/gene="PLN"
/gene_synonym="CMD1P"
/db_xref="GeneID:5350"
/db_xref="HGNC:HGNC:9080"
/db_xref="MIM:172405"
CDS 163..321
/gene="PLN"
/gene_synonym="CMD1P"
/codon_start=1
/product="phospholamban"
/protein_id="AAH05269.1"
/db_xref="GeneID:5350"
/db_xref="HGNC:HGNC:9080"
/db_xref="MIM:172405"
/translation="MEKVQYLTRSAIRRASTIEMPQQARQKLQNLFINFCLILICLLL
ICIIVMLL"
BASE COUNT 610 a 306 c 237 g 538 t
ORIGIN
1 agctaaacac ccgtaagact tcatacaaca caatactcta tactgtgatg atcacagctg
61 ccaaggctac ctaaaagaag acagttatct catatttggc tgccagcttt ttatctttct
121 ctcgaccact taaaacttca gacttcctgt cctgctggta tcatggagaa agtccaatac
181 ctcactcgct cagctataag aagagcctca accattgaaa tgcctcaaca agcacgtcaa
241 aagctacaga atctatttat caatttctgt ctcatcttaa tatgtctctt gctgatctgt
301 atcatcgtga tgcttctctg aagttctgct acaacctcta gatctgcagc ttgccacatc
361 agcttaaaat ctgtcatccc atgcagacag gaaaacaata ttgtataaca gaccacttcc
421 tgagtagaag agtttctttg tgaaaaggtc aagattaaga ctaaaactta ttgttaccat
481 atgtattcat ctgttggatc ttgtaaacat gaaaagggct ttattttcaa aaattaactt
541 caaaataagt gtataaaatg caactgttga tttcctcaac atggctcaca aatttctatc
601 ccaaatcttt tctgaagatg aagagtttag ttttaaaact gcactgccaa caagttcact
661 tcatatataa agcattattt ttactctttt gaggtgaata taatttatat tacaatgtaa
721 aagcttcttt aatactaagt atttttcagg tcttcaccaa gtatcaaagt aataacacaa
781 atgaagtgtc attattcaaa atagtccact gactcctcac atctgttatc ttattataaa
841 gaactatttg tagtaactat cagaatctac attctaaaac agaaattgta ttttttctat
901 gccacattaa catcttttaa agttgatgag aatcaagtat ggaaaagtaa ggccatactc
961 ttacataata aaattccttt taagtaattt tttcaaagaa tcacagaatt ctagtacatg
1021 taggtaaatc ataaatctgt tctaagacat atgatcaaca gatgagaact ggtggttaat
1081 atgtgacagt gagattagtc atatcactaa tactaacaac agaatctaat cttcatttaa
1141 ggcactgtag tgaattatct gagctagagt tacctagctt accatactat atctttggaa
1201 tcatgaaacc ttaagacttc agaatgattt tgcaggttgt cttccattcc agcctaacat
1261 ccaatgcagg caaggaaaat aaaagatttc cagtgacaga aaaatatatt atctcaagta
1321 ttttttaaaa atatatgaat tctctctcca aatattaact aattattaga ttatattttg
1381 aaatgaactt gttggcccat ctattacatc tacagctgac ccttgaacat gggggttagg
1441 ggagctgaca attcgtgggt ccgcaaaatc ttaactacct aatagcctac tattgaccat
1501 aaaccttact gataacataa acagtaaatt aacacatatt ttgcgtgtta tatgtattat
1561 acactatatt cctacaataa agtaagctag agaaaatgtt atttagaaaa tcataagaaa
1621 gagaaaatat atttactatt cattaaatgg aagtgggtca acaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa a
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