LOCUS BC005252 1489 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens geranylgeranyl diphosphate synthase 1, mRNA (cDNA clone MGC:12287 IMAGE:4051481), complete cds. ACCESSION BC005252 VERSION BC005252.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1489) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1489) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 16 Row: l Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21359876. FEATURES Location/Qualifiers source 1..1489 /db_xref="H-InvDB:HIT000032322" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12287 IMAGE:4051481" /tissue_type="Kidney, hypernephroma" /clone_lib="NIH_MGC_58" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1489 /gene="GGPS1" /gene_synonym="GGPPS" /gene_synonym="GGPPS1" /db_xref="GeneID:9453" /db_xref="HGNC:HGNC:4249" /db_xref="MIM:606982" CDS 233..1135 /gene="GGPS1" /gene_synonym="GGPPS" /gene_synonym="GGPPS1" /codon_start=1 /product="geranylgeranyl diphosphate synthase 1" /protein_id="AAH05252.1" /db_xref="GeneID:9453" /db_xref="HGNC:HGNC:4249" /db_xref="MIM:606982" /translation="MEKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPED KLQIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEK VLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAV GLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTI HAIWSRPESTQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQID ARGGNPELVALVKHLSKMFKEENE" BASE COUNT 490 a 274 c 309 g 416 t ORIGIN 1 agtgtgaccg ggatggcgca ttttcttgca ccaactaatg cggtgtcgct ggcggctgag 61 gagggcggag agttctgtgg tgaaatagtg ggaaggattc atgtaggcat cgggaagagc 121 ctaagtccac attataaaat aggaagttga tgcggggtac agttactccc ggaccggcgg 181 cgtgaaagtc gtgatatcat cgttgaacta ttagctttga agtttaaatc caatggagaa 241 gactcaagaa acagtccaaa gaattcttct agaaccctat aaatacttac ttcagttacc 301 aggtaaacaa gtgagaacca aactttcaca ggcatttaat cattggctga aagttccaga 361 ggacaagcta cagattatta ttgaagtgac agaaatgttg cataatgcca gtttactcat 421 cgatgatatt gaagacaact caaaactccg acgtggcttt ccagtggccc acagcatcta 481 tggaatccca tctgtcatca attctgccaa ttacgtgtat ttccttggct tggagaaagt 541 cttaaccctt gatcacccag atgcagtgaa gctttttacc cgccagcttt tggaactcca 601 tcagggacaa ggcctagata tttactggag ggataattac acttgtccca ctgaagaaga 661 atataaagct atggtgctgc agaaaacagg tggactgttt ggattagcag taggtctcat 721 gcagttgttc tctgattaca aagaagattt aaaaccgcta cttaatacac ttgggctctt 781 tttccaaatt agggatgatt atgctaatct acactccaaa gaatatagtg aaaacaaaag 841 tttttgtgaa gatctgacag agggaaagtt ctcatttcct actattcatg ctatttggtc 901 aaggcctgaa agcacccagg tgcagaatat cttgcgccag agaacagaaa acatagatat 961 aaaaaaatac tgtgtacatt atcttgagga tgtaggttct tttgaataca ctcgtaatac 1021 ccttaaagag cttgaagcta aagcctataa acagattgat gcacgtggtg ggaaccctga 1081 gctagtagcc ttagtaaaac acttaagtaa gatgttcaaa gaagaaaatg aataatgtta 1141 agccattctt gattggacct catagcttat tttagttaat cttttttttg tcttttagcc 1201 ttaccacctt ttaaaaaatt tgttattctc cagaaacagt aaataggtga gtaggggtgg 1261 tgcaagtgaa ttcgttttca tttagaagcc cctctgtaca gataatcaaa attcaaagtt 1321 gaaagaatca aaagcagcca cagttatgta ggtctgattt gaatgtcata attgcagtga 1381 caggacattg ccaccaactc tatcctacta ccatcaatgt tgtgtttatt ccgtcaataa 1441 aaaagacttg cttccaggca aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //