LOCUS BC005207 1648 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 35, member A5, mRNA (cDNA clone
MGC:12219 IMAGE:3829330), complete cds.
ACCESSION BC005207
VERSION BC005207.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1648)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1648)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: c Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543636.
FEATURES Location/Qualifiers
source 1..1648
/db_xref="H-InvDB:HIT000032289"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12219 IMAGE:3829330"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_58"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1648
/gene="SLC35A5"
/gene_synonym="FLJ20730"
/db_xref="GeneID:55032"
/db_xref="HGNC:HGNC:20792"
CDS 246..1520
/gene="SLC35A5"
/gene_synonym="FLJ20730"
/codon_start=1
/product="solute carrier family 35, member A5"
/protein_id="AAH05207.1"
/db_xref="GeneID:55032"
/db_xref="HGNC:HGNC:20792"
/translation="MEKQCCSHPVICSLSTMYTFLLGAIFIALSSSRILLVKYSANEE
NKYDYLPTTVNVCSELVKLVFCVLVSFCVIKKDHQSRNLKYASWKEFSDFMKWSIPAF
LYFLDNLIVFYVLSYLQPAMAVIFSNFSIITTALLFRIVLKRRLNWIQWASLLTLFLS
IVALTAGTKTLQHNLAGRGFHHDAFFSPSNSCLLFRSECPRKDNCTAKEWTFPEAKWN
TTARVFSHIRLGMGHVLIIVQCFISSMAIIYNEKILKEGNQLTESIFIQNSKLYFFGI
LFNGLTLGLQRSNRDQIKNCGFFYGHSAFSVALIFVTAFQGLSVAFILKFLDNMFHVL
MAQVTTVIITTVSVLVFDFRPSLEFFLEAPSVLLSIFIYNASKPQVPEYAPRQERIRD
LSGNLWERSSGDGEELERLTKPKSDESDEDTF"
BASE COUNT 439 a 351 c 336 g 522 t
ORIGIN
1 gaacgtgcct gcgcaatggg tgtcgggtcc gctttttccc aatccggacg taatcgtggt
61 ttttgttctg caataggcgg cttagaggga ggggcttttt cgcctatacc tactgtagct
121 tctccacgta tggaccctaa aggctactgc tgctactacg gggctagaca gttactgtct
181 cagctctagg atgtgcgttc ttccactaga agctcttctg agggaggtaa ttaaaaaaca
241 gtggaatgga aaaacagtgc tgtagtcatc ctgtaatatg ctccttgtca acaatgtata
301 cattcctgct aggtgccata ttcattgctt taagctcaag tcgcatctta ctagtgaagt
361 attctgccaa tgaagaaaac aagtatgatt atcttccaac tactgtgaat gtgtgctcag
421 aactggtgaa gctagttttc tgtgtgcttg tgtcattctg tgttataaag aaagatcatc
481 aaagtagaaa tttgaaatat gcttcctgga aggaattctc tgatttcatg aagtggtcca
541 ttcctgcctt tctttatttc ctggataact tgattgtctt ctatgtcctg tcctatcttc
601 aaccagccat ggctgttatc ttctcaaatt ttagcattat aacaacagct cttctattca
661 ggatagtgct gaagaggcgt ctaaactgga tccagtgggc ttccctcctg actttatttt
721 tgtctattgt ggccttgact gccgggacta aaactttaca gcacaacttg gcaggacgtg
781 gatttcatca cgatgccttt ttcagccctt ccaattcctg ccttcttttc agaagtgagt
841 gtcccagaaa agacaattgt acagcaaagg aatggacttt tcctgaagct aaatggaaca
901 ccacagccag agttttcagt cacatccgtc ttggcatggg ccatgttctt attatagtcc
961 agtgttttat ttcttcaatg gctattatct ataatgaaaa gatactgaag gaagggaacc
1021 agctcactga aagcatcttc atacagaaca gcaaactcta tttctttggc attctgttta
1081 atgggctgac tctgggcctt cagaggagta accgtgatca gattaagaac tgtggatttt
1141 tttatggcca cagtgcattt tcagtagccc ttatttttgt aactgcattc cagggccttt
1201 cagtggcttt cattctgaag ttcctggata acatgttcca tgtcttgatg gcccaggtta
1261 ccactgtcat tatcacaaca gtgtctgtcc tggtctttga cttcaggccc tccctggaat
1321 ttttcttgga agccccatca gtccttctct ctatatttat ttataatgcc agcaagcctc
1381 aagttccgga atacgcacct aggcaagaaa ggatccgaga tctaagtggc aatctttggg
1441 agcgttccag tggggatgga gaagaactag aaagacttac caaacccaag agtgatgagt
1501 cagatgaaga tactttctaa ctggtaccca catagtttgc agctctcttg aaccttattt
1561 tcacattttc agtgtttgta atatttatct tttcactttg ataaaccaga aatgtttcca
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//