LOCUS BC005182 999 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens UTP11-like, U3 small nucleolar ribonucleoprotein,
(yeast), mRNA (cDNA clone MGC:12171 IMAGE:3995984), complete cds.
ACCESSION BC005182
VERSION BC005182.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 999)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 999)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: i Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52856412.
FEATURES Location/Qualifiers
source 1..999
/db_xref="H-InvDB:HIT000032271"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12171 IMAGE:3995984"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..999
/gene="UTP11L"
/gene_synonym="CGI-94"
/gene_synonym="CGI94"
/db_xref="GeneID:51118"
/db_xref="HGNC:HGNC:24329"
/db_xref="MIM:609440"
CDS 37..798
/gene="UTP11L"
/gene_synonym="CGI-94"
/gene_synonym="CGI94"
/codon_start=1
/product="UTP11-like, U3 small nucleolar
ribonucleoprotein, (yeast)"
/protein_id="AAH05182.1"
/db_xref="GeneID:51118"
/db_xref="HGNC:HGNC:24329"
/db_xref="MIM:609440"
/translation="MAAAFRKAAKSRQREHRERSQPGFRKHLGLLEKKKDYKLRADDY
RKKQEYLKALRKKALEKNPDEFYYKMTRVKLQDGVHIIKETKEEVTPEQLKLMRTQDV
KYIEMKRVAEAKKIERLKSELHLLDFQGKQQNKHVFFFDTKKEVEQFDVATHLQTAPE
LVDRVFNRPRIETLQKEKVKGVTNQTGLKRIAKERQKQYNCLTQRIEREKKLFVIAQK
IQTRKDLMDKTQKVKVKKETVNSPAIYKFQSRRKR"
BASE COUNT 365 a 193 c 214 g 227 t
ORIGIN
1 gcgttctcca ctgatctttt ccaaggctgt acagacatgg cggcggcttt tcggaaggcg
61 gctaagtccc ggcagcggga acacagagag cgaagccagc ctggctttcg aaaacatctg
121 ggcctgctgg agaaaaagaa agattacaaa cttcgtgcag atgactaccg taaaaaacaa
181 gaatacctca aagctcttcg gaagaaggct cttgaaaaaa atccagatga attctactac
241 aaaatgactc gggttaaact ccaggatgga gtacatatta ttaaggagac taaggaagaa
301 gtaaccccag aacaactaaa gctgatgaga actcaggacg tcaaatatat agaaatgaag
361 agggttgcag aagctaagaa aatcgaaaga ctaaaatcag agctccatct gctggatttc
421 caggggaagc aacagaacaa gcatgtgttc ttttttgaca ccaaaaagga agttgaacag
481 tttgatgtcg caactcacct gcaaacagcc ccggagctag tcgacagagt ctttaatagg
541 cccaggatag agaccttgca gaaagaaaaa gtgaaaggag ttaccaatca gactggactt
601 aagcggatag ctaaagaaag gcaaaagcag tataactgcc tgacacagcg gattgaacga
661 gagaagaaat tgttcgttat tgctcagaaa attcaaacac gcaaagatct tatggataaa
721 actcagaaag tgaaggtgaa gaaagaaacg gtgaactccc cagctattta taaatttcag
781 agtcgtcgaa aacgttgacg tgttatagat aagccttgtc attctgtatc aaaaatctgt
841 tgtcgttttc tagtagcttc aaattccatt actccaaatg gcatggtttt ccggtttgta
901 accataacta aattgtcagt ctgacattta atgtctttct atggacaaca ttaaatctcc
961 ctcccttctg caaaaaaaaa aaaaaaaaaa aaaaaaaaa
//