LOCUS BC005162 2918 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-As) box polypeptide 19A, mRNA (cDNA clone MGC:4651 IMAGE:3530064), complete cds. ACCESSION BC005162 VERSION BC005162.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2918) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2918) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC005162.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 11 Row: m Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147562. FEATURES Location/Qualifiers source 1..2918 /db_xref="H-InvDB:HIT000032258" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4651 IMAGE:3530064" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2918 /gene="DDX19A" /gene_synonym="FLJ11126" /db_xref="GeneID:55308" /db_xref="HGNC:HGNC:25628" CDS 72..1508 /gene="DDX19A" /gene_synonym="FLJ11126" /codon_start=1 /product="DEAD (Asp-Glu-Ala-As) box polypeptide 19A" /protein_id="AAH05162.1" /db_xref="GeneID:55308" /db_xref="HGNC:HGNC:25628" /translation="MATDSWALAVDEQEAAVKSMTNLQIKEEKVKADTNGIIKTSTTA EKTDEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQL LQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDR YPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPG TVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATF EDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQ AMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVC ARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNI LNRIQEHFNKKIERLDTDDLDEIEKIAN" BASE COUNT 784 a 711 c 765 g 658 t ORIGIN 1 cgaggttagg gcccgcgttg cgacgtggtg cagcgcatat tttcacaagt gggtctccct 61 tgtccgggac tatggccacc gactcgtggg ccctggcggt ggacgagcag gaagcggctg 121 tcaagtcgat gaccaatttg cagatcaagg aagagaaagt caaagcagat accaatggta 181 ttatcaaaac cagtaccact gccgagaaaa cagatgaaga ggagaaagag gacagagctg 241 cccagtcctt actcaacaag ctgatcagaa gcaaccttgt tgataacaca aaccaagtgg 301 aagtcctgca acgggatcca aactcccctc tgtactcggt gaagtcgttt gaagagcttc 361 ggctgaaacc acagcttctc cagggagtct atgccatggg cttcaatcga ccctccaaga 421 tacaagagaa cgcattaccc atgatgcttg ctgaaccccc acagaatctg attgcccagt 481 ctcagtctgg cactggtaaa acagctgcct ttgtcttagc catgctcagc cgagtggagc 541 catcagacag atacccccag tgtctgtgcc tctccccaac atatgagctg gcgcttcaaa 601 caggaaaagt gattgagcag atgggcaaat tttacccaga actgaagctt gcctatgccg 661 ttcgaggcaa taaattggaa agaggccaga agatcagtga gcagattgtc attggcaccc 721 ctgggaccgt gctggactgg tgctccaagc tcaagttcat tgatcccaag aaaatcaagg 781 tgtttgttct ggatgaggct gatgtcatga tagccactca gggccaccaa gatcagagca 841 tccgcatcca gaggatgctg cccaggaact gccagatgct gcttttctcc gccacctttg 901 aagactctgt gtggaagttt gcccagaaag tggtcccaga cccaaatgtt atcaaactga 961 agcgtgagga agagaccctg gataccatca agcagtacta tgtcctgtgc agcagcagag 1021 acgagaagtt ccaggccttg tgtaacctct acggggccat caccattgct caagccatga 1081 tcttctgcca tactcgcaaa acagctagtt ggctggcagc agagctctca aaagaaggcc 1141 accaggtggc tctgctgagt ggggagatga tggtggagca gagggctgcg gtgattgagc 1201 gcttccgaga gggcaaagag aaggttttgg tgaccaccaa cgtgtgtgcc cgcggcattg 1261 atgttgaaca agtgtctgtc gtcatcaact ttgatcttcc cgtggacaag gacgggaatc 1321 ctgacaatga gacctacctg caccggatcg ggcgcacggg ccgctttggc aagaggggcc 1381 tggcagtgaa catggtggac agcaagcaca gcatgaacat cctgaacaga atccaggagc 1441 attttaataa gaagatagaa agattggaca cagatgattt ggacgagatt gagaaaatag 1501 ccaactgaga agctccacca gccactgatg ccagccctgg cactgcccct gcacaggaga 1561 caagtgcatt tagggcacag gccccgacat caccccaagg acaacggcag aagtagagag 1621 aaactaccta cctcacttca aattatgttt ggacttgaca aaaataggtg caaatgatgg 1681 ggggcaatag aagaaaaaat ttgcattttg gaaaattggg tcctttcccc acttttttaa 1741 agccacattc ccccatcttt ataataatct ggtcacagtg gtagtcgctg gccccaggac 1801 cccctcctga ttttggctag gcatcgtgga accagctcca gcccctgaag aaacgataga 1861 tgtgcaggtt gtgcggaaga ggctgagtgg aaaatggtgt gagccccacc gctgtgcatc 1921 gaatgaggga agtggcagca gagaggccag agctgccccc tctctgtctc ttcaatggac 1981 ccttcacaag tgtttctcct gcccttgggg ctgtcttcct tctcctgaaa tccagagact 2041 ttcttgctca tcccttctcc ctttcacttc tgttctctgc tgcagaaagc agacttgcat 2101 atccctgatg agcagctcgg ctacttttgt aaacttcaga tttggagaga aacacgaaag 2161 tctgaatcct gaccccttga gagagagtga tctggcgagg gccgatgaag gggctgggcc 2221 tggtcttgcc ttctcttctc tcggttgctc cctctgccta ggcccctggt actcagtcac 2281 ggcagccagg agaccccagg tgagtttctg agcgcatacg tagttggttc ttacccccag 2341 gtgtcacacg gggccgagag ctgagcaaga atttggaatg gaagttatga ccaagggaat 2401 tatgctgttc atttataata gtggacatta tggagagctc tgattcctac ataatatgaa 2461 taaggatgga taggccgggc gtggtggctc atgcctataa tcccagcacg ttgggaggct 2521 gaggcgggcg gatcggttga gctcaggcgt tcgggaccag cctggccaac atgatgaaac 2581 cccgtctcta ccaaaaatag aaaaaaatat agccgggcct ggtggcgcac gcctgtagtc 2641 ccagctactc gggaggctga ggtaggagga tcgcttgagc ctgggtagag gctgctgtga 2701 gctgaaatgg cgccactgca ctccagcctg ggtaacagag cgagaccccg actcaataaa 2761 taaataagga tggataaatt gtagcgtatg caccattcat tatgctaaga cattttaaag 2821 taattatgag aaacgctcta ctaatgattt gtttttattt gtatttttct gcttattaga 2881 caaatatata ctcattttaa aaaaaaaaaa aaaaaaaa //