LOCUS BC005158 1809 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens transmembrane protein 175, mRNA (cDNA clone MGC:4618
IMAGE:3505819), complete cds.
ACCESSION BC005158
VERSION BC005158.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1809)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1809)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC005158.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: a Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147414.
FEATURES Location/Qualifiers
source 1..1809
/db_xref="H-InvDB:HIT000032256"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4618 IMAGE:3505819"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1809
/gene="TMEM175"
/gene_synonym="MGC4618"
/db_xref="GeneID:84286"
/db_xref="HGNC:HGNC:28709"
CDS 99..1613
/gene="TMEM175"
/gene_synonym="MGC4618"
/codon_start=1
/product="transmembrane protein 175"
/protein_id="AAH05158.1"
/db_xref="GeneID:84286"
/db_xref="HGNC:HGNC:28709"
/translation="MSQPRTPEQALDTPGDCPPGRRDEDAGEGIQCSQRMLSFSDALL
SIIATVMILPVTHTEISPEQQFDRSVQRLLATRIAVYLMTFLIVTVAWAAHTRLFQVV
GKTDDTLALLNLACMMTITFLPYTFSLMVTFPDVPLGIFLFCVCVIAIGVVQALIVGY
AFHFPHLLSPQIQRSAHRALYRRHVLGIVLQGPALCFAAAIFSLFFVPLSYLLMVTVI
LLPYVSKVTGWCRDRLLGHREPSAHPVEVFSFDLHEPLSKERVEAFSDGVYAIVATLL
ILDICEDNVPDPKDVKERFSGSLVAALSATGPRFLAYFGSFATVGLLWFAHHSLFLHV
RKATRAMGLLNTLSLAFVGGLPLAYQQTSAFARQPRDELERVRVSCTIIFLASIFQLA
MWTTALLHQAETLQPSVWFGGREHVLMFAKLALYPCASLLAFASTCLLSRFSVGIFHL
MQIAVPCAFLLLRLLVGLALATLRVLRGLARPEHPPPAPTGQDDPQSQLLPAPC"
BASE COUNT 327 a 620 c 503 g 359 t
ORIGIN
1 caagctcccg gccgggctga ctcaagcgga ggcgcgcgga acagtcgccg aggcgattcc
61 cgcccaggct cctgtaaccg ccaggcagcg gccccgccat gtcccagccc cggaccccag
121 agcaggcact ggatacaccg ggggactgcc ccccaggcag gagagacgag gacgctgggg
181 aggggatcca gtgctcccaa cgcatgctca gcttcagtga cgccctgctg tccatcatcg
241 ccaccgtcat gatcctgcct gtgacccaca cggagatctc cccagaacag cagttcgaca
301 gaagtgtaca gaggcttctg gcaacacgga ttgccgtcta cctgatgacc tttctcatcg
361 tgacagtggc ctgggcagca cacacaaggt tgttccaagt tgttgggaaa acagacgaca
421 cacttgccct gctcaacctg gcctgcatga tgaccatcac cttcctgcct tacacgtttt
481 cgttaatggt gaccttccct gatgtgcctc tgggcatctt cttgttctgt gtgtgtgtga
541 tcgccatcgg ggtcgtgcag gcactgattg tggggtacgc attccacttc ccgcacctgc
601 tgagcccgca gatccagcgc tctgcccaca gggctctgta ccgacgacac gtcctgggca
661 tcgtcctcca aggcccggcc ctgtgctttg cagcggccat cttctctctc ttctttgtcc
721 ccttgtctta cctgctgatg gtgactgtca tcctcctccc ctatgtcagc aaggtcaccg
781 gctggtgcag agacaggctc ctgggccaca gggagccctc ggctcaccca gtggaagtct
841 tctcgtttga cctccacgag ccactcagca aggagcgcgt ggaagccttc agcgacggag
901 tctacgccat cgtggccacg cttctcatcc tggacatctg cgaagacaac gtcccggacc
961 ccaaggatgt gaaggagagg ttcagcggca gcctcgtggc cgccctgagt gcgaccgggc
1021 cgcgcttcct ggcgtacttc ggctccttcg ccacagtggg actgctgtgg ttcgcccacc
1081 actcactctt cctgcatgtg cgcaaggcca cgcgggccat ggggctgctg aacacgctct
1141 cgctggcctt cgtgggtggc ctcccactag cctaccagca gacctcggcc ttcgcccggc
1201 agccccgcga tgagctggag cgcgtgcgtg tcagctgcac catcatcttc ctggccagca
1261 tcttccagct ggccatgtgg accacggcgc tgctgcacca ggcggagacg ctgcagccct
1321 cggtgtggtt tggcggccgg gagcatgtgc tcatgttcgc caagctggcg ctgtacccct
1381 gtgccagcct gctggccttc gcctccacct gcctgctgag caggttcagt gtgggcatct
1441 tccacctcat gcagatcgcc gtgccctgcg ccttcctgtt gctgcgcctg ctcgtgggcc
1501 tggccctggc caccctgcgg gtcctgcggg gcctcgcccg gcccgaacac cccccgccag
1561 cccccacggg ccaggacgac ccacagtccc agctcctccc tgccccctgc tagcagccac
1621 agagcccact cccagccgtc ctcaccagag atggaccagg gaggacagga tgctgggcag
1681 gggaagccaa gtcacgggca ggccgcagtg gttcttgcgt ggcctggttt tattttcatt
1741 gtgaaatatc atgctcttat ttcagtcctc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaa
//