LOCUS BC005152 1277 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 16 open reading frame 80, mRNA (cDNA clone
MGC:3336 IMAGE:3528301), complete cds.
ACCESSION BC005152
VERSION BC005152.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1277)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1277)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC005152.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: i Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42716281.
FEATURES Location/Qualifiers
source 1..1277
/db_xref="H-InvDB:HIT000032250"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3336 IMAGE:3528301"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1277
/gene="C16orf80"
/gene_synonym="GTL3"
/db_xref="GeneID:29105"
/db_xref="HGNC:HGNC:29523"
CDS 247..828
/gene="C16orf80"
/gene_synonym="GTL3"
/codon_start=1
/product="chromosome 16 open reading frame 80"
/protein_id="AAH05152.1"
/db_xref="GeneID:29105"
/db_xref="HGNC:HGNC:29523"
/translation="MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQS
LVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRR
FRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHANC
RIRRVYFSDRLYSEDELPAEFKLYLPVQNKAKQ"
BASE COUNT 340 a 308 c 314 g 315 t
ORIGIN
1 gcggcgcgga cggtagttgc tgtggtttcc gttctgagct cgcagcttag gagctgaaga
61 tcgcggactt agcgttgccg cgtccgagtc cggccatcag tggctgcaga tccggaggcc
121 aggagctcaa ccacccttct tcggaacagg gccggcctgc tgctgtgccc tcgacgctcg
181 gtgcctgtat ctactccggg gcctaggtcg gctccggggg cggcttagga gaaggccgcc
241 ggcgagatgt tcaaaaacac gttccagagc ggcttcctct ccatcctcta cagcatcggc
301 agcaagcctc tgcaaatctg ggacaaaaag gtacggaatg gccacatcaa aagaatcact
361 gataatgaca tccagtccct ggtgctagag attgaaggga caaatgtaag caccacatat
421 atcacatgcc ctgcagaccc caagaagacg ctgggaatta aacttccttt ccttgtcatg
481 attatcaaaa acctgaagaa gtattttacc ttcgaagtgc aggtactaga tgacaagaat
541 gtgcgtcgtc gctttcgggc aagtaactac cagagcacca cccgggtcaa acccttcatc
601 tgcaccatgc ccatgcggct ggatgacggc tggaaccaga ttcagttcaa cttgctagac
661 ttcacacggc gagcatacgg caccaattac atcgagaccc tcagagtgca gatccatgca
721 aattgtcgca tccgacgggt ttacttctca gacagactct actcagaaga tgagctgccg
781 gcagagttca aactgtatct cccagttcag aacaaggcaa agcaataact ggaattgtga
841 ctcgagggat agacccctgg atgtgactct tctttttaaa aggaaactat gtggaggacg
901 atgcaaaaac atatttatct tagtttgctc tgctgtagtt ctgttattta tacttggtgt
961 tgcttgtcat ggacaccggt gaacatgccg taactctgtg actgcattgt aagtgcagtg
1021 ggggtaagca gtcctgtgag tggcgcatga acgctggagc ttattccgcc gcctgcccca
1081 gtgtgggggg agataccttt accatgaact tacagaatta aagatggccc ataaggaatt
1141 ccagaccaat atttcttcct gcggtttatt ctatgtttta tatattatct aaatatatgt
1201 atatgctgtg tcatactcat aatctggaaa tgaataaagt gatatattcc tggtttgtaa
1261 aaaaaaaaaa aaaaaaa
//