LOCUS BC005149 2078 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens mucolipin 1, mRNA (cDNA clone MGC:3287 IMAGE:3507836),
complete cds.
ACCESSION BC005149
VERSION BC005149.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2078)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2078)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC005149.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: c Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10092596.
FEATURES Location/Qualifiers
source 1..2078
/db_xref="H-InvDB:HIT000032248"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3287 IMAGE:3507836"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2078
/gene="MCOLN1"
/gene_synonym="ML4"
/gene_synonym="MLIV"
/gene_synonym="MST080"
/gene_synonym="MSTP080"
/gene_synonym="TRP-ML1"
/gene_synonym="TRPML1"
/db_xref="GeneID:57192"
/db_xref="HGNC:HGNC:13356"
/db_xref="MIM:605248"
CDS 124..1866
/gene="MCOLN1"
/gene_synonym="ML4"
/gene_synonym="MLIV"
/gene_synonym="MST080"
/gene_synonym="MSTP080"
/gene_synonym="TRP-ML1"
/gene_synonym="TRPML1"
/codon_start=1
/product="mucolipin 1"
/protein_id="AAH05149.1"
/db_xref="GeneID:57192"
/db_xref="HGNC:HGNC:13356"
/db_xref="MIM:605248"
/translation="MTAPAGPRGSETERLLTPNPGYGTQAGPSPAPPTPPEEEDLRRR
LKYFFMSPCDKFRAKGRKPCKLMLQVVKILVVTVQLILFGLSNQLAVTFREENTIAFR
HLFLLGYSDGADDTFAAYTREQLYQAIFHAVDQYLALPDVSLGRYAYVRGGGDPWTNG
SGLALCQRYYHRGHVDPANDTFDIDPMVVTDCIQVDPPERPPPPPSDDLTLLESSSSY
KNLTLKFHKLVNVTIHFRLKTINLQSLINNEIPDCYTFSVLITFDNKAHSGRIPISLE
TQAHIQECKHPSVFQHGDNSFRLLFDVVVILTCSLSFLLCARSLLRGFLLQNEFVGFM
WRQRGRVISLWERLEFVNGWYILLVTSDVLTISGTIMKIGIEAKNLASYDVCSILLGT
STLLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGPY
HVKFRSLSMVSECLFSLINGDDMFVTFAAMQAQQGRSSLVWLFSQLYLYSFISLFIYM
VLSLFIALITGAYDTIKHPGGAGAEESELQAYIAQCQDSPTSGKFRRGSGSACSLLCC
CGRDPSEEHSLLVN"
BASE COUNT 389 a 675 c 587 g 427 t
ORIGIN
1 atcagctgat gccggagggt ttgaagccgc gccgcgaggg agcgaggtcg cagtgacagc
61 ggcgggcgat cggacccagg ctgccccgcc gtacccgcct gcgtcccgcg ctcccgcccc
121 agcatgacag ccccggcggg tccgcgcggc tcagagaccg agcggcttct gacccccaac
181 cccgggtatg ggacccaggc ggggccttca ccggcccctc cgacaccccc agaagaggaa
241 gaccttcgcc gtcgtctcaa atactttttc atgagtccct gcgacaagtt tcgagccaag
301 ggccgcaagc cctgcaagct gatgctgcaa gtggtcaaga tcctggtggt cacggtgcag
361 ctcatcctgt ttgggctcag taatcagctg gctgtgacat tccgggaaga gaacaccatc
421 gccttccgac acctcttcct gctgggctac tcggacggag cggatgacac cttcgcagcc
481 tacacgcggg agcagctgta ccaggccatc ttccatgctg tggaccagta cctggcgttg
541 cctgacgtgt cactgggccg gtatgcgtat gtccgtggtg ggggtgaccc ttggaccaat
601 ggctcagggc ttgctctctg ccagcggtac taccaccgag gccacgtgga cccggccaac
661 gacacatttg acattgatcc gatggtggtt actgactgca tccaggtgga tccccccgag
721 cggccccctc cgccccccag cgacgatctc accctcttgg aaagcagctc cagttacaag
781 aacctcacgc tcaaattcca caagctggtc aatgtcacca tccacttccg gctgaagacc
841 attaacctcc agagcctcat caataatgag atcccggact gctatacctt cagcgtcctg
901 atcacgtttg acaacaaagc acacagtggg cggatcccca tcagcctgga gacccaggcc
961 cacatccagg agtgtaagca ccccagtgtc ttccagcacg gagacaacag cttccggctc
1021 ctgtttgacg tggtggtcat cctcacctgc tccctgtcct tcctcctctg cgcccgctca
1081 ctccttcgag gcttcctgct gcagaacgag tttgtggggt tcatgtggcg gcagcgggga
1141 cgggtcatca gcctgtggga gcggctggaa tttgtcaatg gctggtacat cctgctcgtc
1201 accagcgatg tgctcaccat ctcgggcacc atcatgaaga tcggcatcga ggccaagaac
1261 ttggcgagct acgacgtctg cagcatcctc ctgggcacct cgacgctgct ggtgtgggtg
1321 ggcgtgatcc gctacctgac cttcttccac aactacaata tcctcatcgc cacactgcgg
1381 gtggccctgc ccagcgtcat gcgcttctgc tgctgcgtgg ctgtcatcta cctgggctac
1441 tgcttctgtg gctggatcgt gctggggccc tatcatgtga agttccgctc actctccatg
1501 gtgtctgagt gcctgttctc gctcatcaat ggggacgaca tgtttgtgac gttcgccgcc
1561 atgcaggcgc agcagggccg cagcagcctg gtgtggctct tctcccagct ctacctttac
1621 tccttcatca gcctcttcat ctacatggtg ctcagcctct tcatcgcgct catcaccggc
1681 gcctacgaca ccatcaagca tcccggcggc gcaggcgcag aggagagcga gctgcaggcc
1741 tacatcgcac agtgccagga cagccccacc tccggcaagt tccgccgcgg gagcggctcg
1801 gcctgcagcc ttctctgctg ctgcggaagg gacccctcgg aggagcattc gctgctggtg
1861 aattgattcg acctgactgc cgttggaccg taggccctgg actgcagaga cccccgcccc
1921 cgaccccgct tatttatttg tagggtttgc ttttaaggat cggctccctg tcgcgcccga
1981 ggagggcctg gacctttcgt gtcggaccct tgggggcggg gagactgggt ggggagggtg
2041 ttgaataaaa gggaaaataa aaaaaaaaaa aaaaaaaa
//