LOCUS BC005148 2492 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ribulose-5-phosphate-3-epimerase, mRNA (cDNA clone
MGC:2636 IMAGE:3505010), complete cds.
ACCESSION BC005148
VERSION BC005148.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2492)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2492)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC005148.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: e Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40385882.
FEATURES Location/Qualifiers
source 1..2492
/db_xref="H-InvDB:HIT000086469"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2636 IMAGE:3505010"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2492
/gene="RPE"
/gene_synonym="MGC2636"
/gene_synonym="RPE2-1"
/db_xref="GeneID:6120"
/db_xref="HGNC:HGNC:10293"
/db_xref="MIM:180480"
CDS 6..692
/gene="RPE"
/gene_synonym="MGC2636"
/gene_synonym="RPE2-1"
/codon_start=1
/product="ribulose-5-phosphate-3-epimerase"
/protein_id="AAH05148.2"
/db_xref="GeneID:6120"
/db_xref="HGNC:HGNC:10293"
/db_xref="MIM:180480"
/translation="MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFV
PNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPG
ALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV
HWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCS
EAAQKRSLDR"
BASE COUNT 783 a 412 c 521 g 776 t
ORIGIN
1 gcggtatggc gtcgggctgc aagattggcc cgtccatcct caacagcgac ctggccaatt
61 taggggccga gtgcctccgg atgctagact ctggggccga ttatctgcac ctggacgtaa
121 tggacgggca ttttgttccc aacatcacct ttggtcaccc tgtggtagaa agccttcgaa
181 agcagctagg ccaggaccct ttctttgaca tgcacatgat ggtgtccaag ccagaacagt
241 gggtaaagcc aatggctgta gcaggagcca atcagtacac ctttcatctc gaggctactg
301 agaacccagg ggctttgatt aaagacattc gggagaatgg gatgaaggtt ggccttgcca
361 tcaaaccagg aacctcagtt gagtatttgg caccatgggc taatcagata gatatggcct
421 tggttatgac agtggaaccg gggtttggag ggcagaaatt catggaagat atgatgccaa
481 aggttcactg gttgaggacc cagttcccat ctttggatat agaggtcgat ggtggagtag
541 gtcctgacac tgtccataaa tgtgcagagg caggagctaa catgattgtg tctggcagtg
601 ctattatgag gagtgaagac cccagatctg tgatcaatct attaagaaat gtttgctcag
661 aagctgctca gaaacgttct cttgatcggt gaaaccataa ggagcccagt gttcctgttc
721 atgaaatctc ccttttactg gaaaacagga atattgacta ccaaatcaca atgcaattga
781 agccgtactg cttttttgag cagttattca ttccagtgat taaaactgat tgtgcagaat
841 attctaagag gtcagaaatt ggtgtgtata actacatttt tagtgatgca atttattgat
901 tagtgagtaa gatactgttt ttattgagag atttgatttt tataaagtaa aaatacggct
961 gcattagggt tacaaacaga aaagtgtctt aatgtctaag gagggcatat tagctacact
1021 acaaaaacaa attttgtctg tacttctgaa aagaattttg ttgtttctca gctgttttcc
1081 aaaagcaaag gaagtcttta tggttttttt ctatttcatg ttattgtgat ttgtttataa
1141 gtttgggtgg ggtgcatacc atattcttgg ttcttaaaat ctatcacttt tcaccttaca
1201 cttgatgtgt gaaaactata aaaacaatgt gtgaaaccca ggggttctaa aatacaagca
1261 tagattttat cagggtgttt tgtcaaagca ggttattcag tgattcctcc ccaccattct
1321 taagaacgtt aaataatgct gttgtgttag ctctgagtag aaaggaaaaa gtaaaacctc
1381 tgtttggagg taatattggg ttgaattctg actgcccctt tctagctgga cctttaacaa
1441 atcacccaat cttttttgtg tttctctaaa gtcatttata cattaaatgt aattatagca
1501 actgtggggt tctgttgaga attaagagct aacactatat atgtaaagtt tccagtacta
1561 gtcccagaat ttagaatatg ctcaacacaa agtaaacagc attatataag tttatatttt
1621 tgtgagttat aaagtacttt gatatattct cattaaatct gtaaatcacc tctataagta
1681 agtggtaata ataaagcaga tatttttgtc cccatttaaa aaatgaagaa attaatgctt
1741 aatagggtgg taccctggaa aggatctggg aagtggtaga atttctggtc tgtactttta
1801 caaatggagc ccttgggagg tgggttaggt aaaagaagct ttttacttaa cgttgtctta
1861 tttccagtct aattttacgc tgtagcagaa ccagatggct gagaaaattc tggaactatg
1921 gatcttgacc ccaaggatat attattttat tccaagaaag atcaggtagg cgaaaagatg
1981 acaggataca gagtcaatcc ataaactaaa tatttataac tgttctgaat tatacagagt
2041 ctaaaaatat gtgtcagcta cttcattcct gtaaatactc ttgctgtgtt ataaatatgg
2101 caagaaataa acatgaccaa tatcaataga cttcttgagg ctactataag ttttgagaaa
2161 taaggttcaa aaaataagaa tgctaacact taagcacaga ctagagcttg cttgggtttc
2221 ttcctgcatt acaaggtaaa aatttgttaa tgtttgtttt tattcagctt gggaaagctt
2281 tgtgccatga atacgtcgca tttaataaca agcaacacac ggcatataga aataacttta
2341 attaaaaaac ttacatagaa gattataata tcagacgtga caaagatttg agtttatttg
2401 cctggacaac ttgggtttgt ctggcttttg ttttcttttt ctttaaaaat aaatgtacag
2461 taaaactaaa aaaaaaaaaa aaaaaaaaaa aa
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