LOCUS BC005110 3038 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens sorting nexin 14, mRNA (cDNA clone MGC:13217
IMAGE:3959086), complete cds.
ACCESSION BC005110
VERSION BC005110.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3038)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3038)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: m Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39777616.
FEATURES Location/Qualifiers
source 1..3038
/db_xref="H-InvDB:HIT000032217"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13217 IMAGE:3959086"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3038
/gene="SNX14"
/gene_synonym="MGC13217"
/gene_synonym="RGS-PX2"
/gene_synonym="RP11-321N4.2"
/db_xref="GeneID:57231"
/db_xref="HGNC:HGNC:14977"
CDS 168..2849
/gene="SNX14"
/gene_synonym="MGC13217"
/gene_synonym="RGS-PX2"
/gene_synonym="RP11-321N4.2"
/codon_start=1
/product="sorting nexin 14"
/protein_id="AAH05110.2"
/db_xref="GeneID:57231"
/db_xref="HGNC:HGNC:14977"
/translation="MVPWVRTMGQKLKQRLRLDVGREICRQYPLFCFLLLCLSAASLL
LNRYIHILMIFWSFVAGVVTFYCSLGPDSLLPNIFFTIKYKPKQLGLQELFPQGHSCA
VCGKVKCKRHRPSLLLENYQPWLDLKISSKVDASLSEVDIPSIITKKLLKAAMKHIEV
IVKARQKVKNTEFLQQAALEEYGPELHVALRSRRDELHYLRKLTELLFPYILPPKATD
CRSLTLLIREILSGSVFLPSLDFLADPDTVNHLLIIFIDDSPPEKATEPASPLVPFLQ
KFAEPRNKKPSVLKLELKQIREQQDLLFRFMNFLKQEGAVHVLQFCLTVEEFNDRILR
PELSNDEMLSLHEELQKIYKTYCLDESIDKIRFDPFIVEEIQRIAEGPYIDVVKLQTM
RCLFEAYEHVLSLLENVFTPMFCHSDEYFRQLLRGAESPTRNSKLNRNTQKRGESFGI
SRIGSKIKGVFKSTTMEGAMLPNYGVAEGEDDFIEEGIVVMEDDSPVEAVSTPNTPRN
LAAWKISIPYVDFFEDPSSERKEKKERIPVFCIDVERNDRRAVGHEPEHWSVYRRYLE
FYVLESKLTEFHGAFPDAQLPSKRIIGPKNYEFLKSKREEFQEYLQKLLQHPELSNSQ
LLADFLSPNGGETQFLDKILPDVNLGKIIKSVPGKLMKEKGQHLEPFIMNFINSCESP
KPKPSRPELTILSPTSENNKKLFNDLFKNNANRAENTERKQNQNYFMEVMTVEGVYDY
LMYVGRVVFQVPDWLHHLLMGTRILFKNTLEMYTDYYLQCKLEQLFQEHRLVSLITLL
RDAIFCENTEPRSLQDKQKGAKQTFEEMMNYIPDLLVKCIGEETKYESIRLLFDGLQQ
PVLNKQLTYVLLDIVIQELFPELNKVQKEVTSVTSWM"
BASE COUNT 949 a 564 c 642 g 883 t
ORIGIN
1 gtggggctgg gcccagccgg acgcgacctc agcctgcggc ggctaactgc cggtaggcgt
61 ctgtgtgcgc cgccaagtcg gtggggcggg gacgcgaggt gtggatgggg ggtcgccttg
121 acctctgcct cagccagtag cgcagtctcg gcctcgccgt tacggagatg gtgccctggg
181 tgcggacgat ggggcagaag ctgaagcagc ggctgcgact ggacgtggga cgcgagatct
241 gccgccagta cccgctgttc tgcttcctgc tgctctgtct cagcgccgcc tccctgcttc
301 ttaacaggta tattcatatt ttaatgatct tctggtcatt tgttgctgga gttgtcacat
361 tctactgctc actaggacct gattctctct taccaaatat attcttcaca ataaaataca
421 aacccaagca gttaggactt caggaattat ttcctcaagg tcatagctgt gctgtttgtg
481 gtaaagtgaa atgtaaacga cataggcctt ctttgctact tgaaaactac cagccatggc
541 tagacctgaa aatttcttcc aaggttgatg catctctctc agaggtggat attccatcta
601 ttataaccaa gaaactatta aaagcagcaa tgaagcatat agaagtgata gttaaagcca
661 gacagaaagt aaaaaataca gagtttttac agcaagctgc tttagaagaa tatggtccag
721 agcttcatgt tgctttgaga agtcgaagag atgaattgca ctatttaagg aaacttactg
781 aactgctttt tccttatatt ttgcctccta aagcaacaga ctgcagatct ctgaccttac
841 ttataagaga gattctgtct ggctctgtgt tccttccttc tttggatttc ctagctgatc
901 cagatactgt gaatcatttg cttatcatct tcatagatga cagtccacct gaaaaagcaa
961 ctgaaccggc ttctcctttg gttccattct tgcagaaatt tgcagaacct agaaataaaa
1021 agccatctgt gctgaagtta gaattgaagc aaatcagaga gcaacaagat cttttatttc
1081 gttttatgaa ctttctgaaa caagaaggcg cagtgcacgt gttgcagttt tgtttgactg
1141 tggaggaatt taatgataga attttacgac cagaattatc aaatgatgaa atgctgtctc
1201 ttcatgaaga attgcagaag atttataaaa catactgttt ggatgaaagt attgacaaaa
1261 ttagatttga tcccttcatt gtagaagaga ttcaaagaat tgctgaaggc ccatacatag
1321 atgttgtgaa acttcaaact atgagatgtc tttttgaagc atatgaacat gttctttccc
1381 ttttggagaa tgtatttact cctatgttct gccatagtga tgagtatttc agacaacttt
1441 taagaggtgc agaatcacca acacgcaatt caaaattgaa caggaacaca cagaaaaggg
1501 gagaatcatt tggaatcagc agaataggta gcaaaattaa aggagtattc aaaagtacca
1561 caatggaggg agctatgttg cctaattatg gtgtagctga aggtgaagat gattttattg
1621 aagaaggtat tgttgtaatg gaagatgatt ctccagtgga ggctgtgagc acacctaata
1681 ctccccgaaa ccttgctgca tggaaaatta gcattccata tgtagacttt tttgaggatc
1741 cctcctctga aaggaaggag aaaaaagaaa gaattcctgt gttttgtatt gatgttgaaa
1801 gaaatgatag aagagcagtt ggacacgagc ctgaacattg gtctgtctat agaagatatc
1861 ttgaattcta tgtacttgaa tcaaaactaa cagaatttca tggtgcattt cctgatgccc
1921 agcttccttc taagaggatc attggcccca aaaattatga attcttaaag tcaaagaggg
1981 aagagttcca agaatatcta cagaaacttc tgcagcatcc agaactgagt aatagtcaac
2041 ttctggcaga ctttctttcc cctaatggtg gggaaacaca atttcttgat aagatactac
2101 cagatgtaaa tcttgggaaa attataaaat ctgttcctgg aaaactaatg aaagagaaag
2161 gtcagcattt ggaacctttt atcatgaatt tcattaattc ttgtgagtct ccaaagccta
2221 aaccaagtag accagaactg accattctca gccctacttc agaaaacaac aagaagcttt
2281 tcaatgatct gtttaaaaat aatgcaaacc gtgctgaaaa tacagagaga aagcaaaatc
2341 agaattattt tatggaggtg atgactgtag aaggagtcta tgattacctg atgtatgtag
2401 gacgggtagt tttccaggtt cctgactggc ttcatcatct cttaatggga actcgaatcc
2461 tctttaaaaa caccctggaa atgtatactg attactatct tcagtgtaaa ctagaacagc
2521 tatttcagga gcaccgtttg gtctcactca taacacttct cagagatgct atattctgtg
2581 aaaacactga acctcgctct ctccaagata agcaaaaagg agcaaaacag acttttgaag
2641 aaatgatgaa ttacattcca gatctgttag tcaagtgtat tggtgaagaa accaagtatg
2701 aaagcatcag acttctgttt gatggcttac agcaaccagt actcaacaag cagctgactt
2761 atgttttatt ggacattgtg atacaggaac tgtttccaga gctcaataag gtacaaaagg
2821 aagttacctc tgtgacatct tggatgtaaa cacttggatt tggtatagaa taacccattg
2881 aaatttctgc tgtgcgaggg tggtagaaat ttactttttt gggtatattc ttatatatat
2941 tatgtacatc gctgtctgaa attttagtta ttttttgttt ttaataaaga ctaacacaaa
3001 cttaatgatt aaaagtgaaa aaaaaaaaaa aaaaaaaa
//