LOCUS BC005090 1320 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens agmatine ureohydrolase (agmatinase), mRNA (cDNA clone
MGC:13078 IMAGE:3837251), complete cds.
ACCESSION BC005090
VERSION BC005090.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1320)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1320)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: k Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37537721.
FEATURES Location/Qualifiers
source 1..1320
/db_xref="H-InvDB:HIT000032209"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13078 IMAGE:3837251"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1320
/gene="AGMAT"
/gene_synonym="FLJ23384"
/db_xref="GeneID:79814"
/db_xref="HGNC:HGNC:18407"
CDS 144..1202
/gene="AGMAT"
/gene_synonym="FLJ23384"
/codon_start=1
/product="agmatine ureohydrolase (agmatinase)"
/protein_id="AAH05090.1"
/db_xref="GeneID:79814"
/db_xref="HGNC:HGNC:18407"
/translation="MLRLLASGCARGPGPGVGARPAAGLFHPGRRQSRQASDAPRNQP
PSPEFVARPVGVCSMMRLPVQTSPEGLDAAFIGVPLDTGTSNRPGARFGPRRIREESV
MLRTVNPSTGALPFQSLMVADLGDVNVNLYNLQDSCRRIQEAYEKIVAAGCIPLTLGG
DHTITYPILQAMAKKHGPVGLLHVDAHTDTTDKALGEKLYHGAPFRRCVDEGLLDCKR
VVQIGIRGSSTTLDPYRYNRSQGFRVVLAEDCWMKSLVPLMGEVRQQMGGKPIYISFD
IDALDPAYAPGTGTPEIAGLTPSQALEIIRGCQGLNVMGCDLVEVSPPYDLSGNTALL
AANLLFEMLCALPKVTTV"
BASE COUNT 265 a 383 c 403 g 269 t
ORIGIN
1 cttgatccca gggcgcccct gacctttgag ccggctcggg ttccggctct ggcgcgtgca
61 cactcgcctc gccgttcggg accagccaga tcgcggcggc ctcgcgggcg gtctggtcgg
121 tgaggtcttg gccgcgcgcg gcaatgctga ggctgctggc gtccgggtgc gcccggggcc
181 cggggcccgg cgtgggcgcg cgtcctgccg cagggctctt tcatccgggg cgccgccaga
241 gccgccaggc ttccgatgcg ccccggaacc agccccccag ccccgagttc gtggcccggc
301 cggtgggcgt ctgctccatg atgcgcctgc cggtgcagac ctcccccgag gggctggacg
361 ctgccttcat cggggtgccc ctggatactg ggacctccaa ccggcctggg gcgagattcg
421 gacctcgccg catccgggaa gaatcagtga tgcttcggac agtcaatcct agcacggggg
481 ccctcccctt ccagtccctc atggttgcag acctaggcga tgtgaatgtc aatctttaca
541 accttcagga cagctgccgg cgaattcaag aggcctatga gaaaattgta gcagctggct
601 gtattcctct gaccttgggt ggagatcaca caatcacata tcccatattg caagcgatgg
661 caaaaaagca tggcccagtg gggctgctgc acgtggatgc gcacacggac acgaccgaca
721 aggccctagg agagaagctc taccacgggg cgcccttccg ccggtgtgtg gatgagggtc
781 tcctggactg taagcgtgtg gtgcagattg gcatccgggg ctcttccacg accttggatc
841 cctacagata caaccggagc cagggcttcc gggtagtcct ggctgaagac tgctggatga
901 agtcgctggt tcctctgatg ggggaagtca ggcagcagat gggaggcaaa cccatttata
961 tcagctttga tattgacgct ctggatcctg cctatgcgcc agggacaggg acacctgaaa
1021 ttgctggtct cactcctagt caggctctgg agatcatcag gggttgtcaa ggcctgaacg
1081 tgatgggctg tgatcttgtc gaagtttcac caccgtatga tctttctggg aacacagccc
1141 tgctggcggc taacctgctg tttgagatgc tatgtgctct ccccaaagtg acaaccgtct
1201 gagtcttgtg ctcttcaaga caaaacagat tgcgtcgctg acaagttctc aagaagaact
1261 tatgagtaag cagtctgaga actaaagagt ttatgccaag aaaaaaaaaa aaaaaaaaaa
//