LOCUS       BC005079                2533 bp    mRNA    linear   HUM 01-SEP-2006
DEFINITION  Homo sapiens chromosome 2 open reading frame 42, mRNA (cDNA clone
            MGC:13036 IMAGE:3615724), complete cds.
ACCESSION   BC005079
VERSION     BC005079.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2533)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2533)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-MAR-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC/DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 18 Row: g Column: 14
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 8923527.
FEATURES             Location/Qualifiers
     source          1..2533
                     /db_xref="H-InvDB:HIT000032203"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:13036 IMAGE:3615724"
                     /tissue_type="Skin, melanotic melanoma."
                     /clone_lib="NIH_MGC_20"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..2533
                     /gene="C2orf42"
                     /gene_synonym="FLJ20558"
                     /db_xref="GeneID:54980"
                     /db_xref="HGNC:HGNC:26056"
     CDS             318..2042
                     /gene="C2orf42"
                     /gene_synonym="FLJ20558"
                     /codon_start=1
                     /product="chromosome 2 open reading frame 42"
                     /protein_id="AAH05079.1"
                     /db_xref="GeneID:54980"
                     /db_xref="HGNC:HGNC:26056"
                     /translation="MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKN
                     KTCGTIFRYGARKQPSVEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTV
                     DGTIITQLSSGRCYVPSCLKAATQGVVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQ
                     ASPETKQTIWQLATEPTGPLVQRITKNILVVKCKASQKHSLGYLHTSFVQKVSGKSLP
                     ERRFFCSCQTLKSHKSNASKDETAQRCIHFFACICAFASDETLAQEFSDFLNFDSSGL
                     KEIIVPQLGCHSESTVSACESTASKSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSGL
                     KKPVVASSLKRQACGQLLDEAQVTLSFQDWLASVTERIHQTMHYQFDGKPEPLVFHIP
                     QSFFDALQQRISIGSAKKRLPNSTTAFVRKDALPLGTFSKYTWHITNILQVKQILDTP
                     EMPLEITRSFIQNRDGTYELFKCPKVEVESIAETYGRIEKQPVLRPLELKTFLKVGNT
                     SPDQKEPTPFIIEWIPDILPQSKIGELRIKFEYGHHRNGHVAEYQDQRPPLDQPLELA
                     PLTTITFP"
BASE COUNT          728 a          590 c          569 g          646 t
ORIGIN      
        1 gtttgtaaaa ggccgcggca ggcgaagaga gaagagacta tcaagatctc cacttaggga
       61 agtgggaatc ttatttgcgg aacattgggc agaagctttg ccattggctg gtggagaagg
      121 aggaggcaga atgtctgcat tgttacacca tacagctcaa acttcagaag attttgggtt
      181 aagcagttat cattagtctg caaatgatcg tgttttcacc tgatcattag aaactaatga
      241 aacacctttt aagtcttatg aattcaggtt acactgtttt ccagatgcct tggcagctgg
      301 tacagggcct ctgaaaaatg gaaccaaatt ctctgaggac taaagtccca gctttcttat
      361 ctgatttggg gaaggccaca ttgaggggaa tcagaaagtg tccccgatgt ggcacataca
      421 atggaacccg gggactgagc tgtaagaaca agacatgtgg aaccatattc cgctacggtg
      481 cacgcaagca gcctagtgtt gaagctgtca aaatcattac aggctctgat cttcaggtct
      541 actcagtgcg gcaaagagac cggggccctg attaccgatg ctttgtggag ctcggggttt
      601 cagagacaac aatccagaca gtggatggga cgatcatcac tcagctgagc tctggacggt
      661 gttatgtccc ctcatgcctg aaagctgcca ctcaaggcgt tgtggaaaac cagtgccagc
      721 acatcaagct ggcggtgaac tgccaggcag aggccacccc tctgaccctg aagagctcgg
      781 tcctgaatgc aatgcaggcc tccccggaaa ccaaacagac catctggcag ttggccacgg
      841 aacccacagg tcctctggtg cagagaatta ctaaaaacat cttggtggtg aaatgcaagg
      901 caagccagaa gcacagtttg gggtatttgc atacatcttt tgtgcagaaa gtcagtggca
      961 aaagcttgcc tgagcgccgc ttcttctgct cctgtcagac tctgaaatcg cacaagtcaa
     1021 atgcctccaa ggatgagaca gcccagagat gcattcattt ctttgcttgc atctgtgcct
     1081 ttgccagtga tgagacactg gctcaggaat tctcagactt cctaaatttt gattccagcg
     1141 gtcttaaaga gattattgta ccccagttag gttgccattc agaatcaaca gtatctgctt
     1201 gtgagtctac tgcctctaag tcaaagaaga ggagaaagga tgaagtatct ggtgcacaga
     1261 tgaacagttc actactgcct caagatgcag tgagcagtaa tctaaggaaa agtggcctga
     1321 aaaagcctgt ggttgcttcc tcgttaaaaa ggcaggcctg tggtcagctg ttagatgagg
     1381 cacaagtgac tttatccttc caagactggc tggccagtgt cacagaacgc atccatcaaa
     1441 ccatgcacta tcagtttgat ggcaaaccag aaccattggt gttccacatt cctcagtcat
     1501 tttttgatgc cctgcaacaa agaatatcta taggaagtgc aaaaaaacgg ctccccaact
     1561 ccaccacagc ttttgttcgg aaagatgcct tgccactggg aaccttttcc aagtatactt
     1621 ggcatatcac taatatcctg caagttaaac aaatcttaga taccccagag atgcccttgg
     1681 aaatcacccg tagctttatc cagaaccgag atgggactta tgagctattt aaatgcccta
     1741 aagtggaagt agaaagcata gcagaaacct acggtcgtat agaaaaacaa ccagtgctgc
     1801 gacccttgga actaaaaact tttctcaaag ttggcaacac ttccccagat caaaaggagc
     1861 caacaccttt catcattgag tggatcccag atatccttcc ccaatctaag attggcgagc
     1921 tgcggatcaa gtttgagtat ggccaccacc ggaatgggca tgtggcggag taccaagacc
     1981 agcggccccc cttggaccag cccttggaac tggcccctct gaccactatt actttccctt
     2041 aaagcaaaac aagataataa tcttttgctg cttaatttgc acatccccac cccttgacaa
     2101 ctttaaatgc tagttaggca cttagatggc cctgttcctt ggtaaactgc tcttagctaa
     2161 gatgcaaatt ctcagtgctt tcaagtggat tctgttgaag aaaatctctt gtaaatagcc
     2221 tttttgatgc tgctgtgtac agtcttcatt atgcattggg cagtatttct ggctagagtt
     2281 ttaaaaggaa cagaaagaaa accagcttat tttccttctt acggactcat ctttagcgtt
     2341 tatttcaacc ttttgctaat tctctgagaa atctgcagca ctcagccata caccaacagt
     2401 gttggaaagt taacaccctg gttagggcag aatgttaaag accatcttgg cagagttcca
     2461 gccacgctct ttattctgtt ctcaaataaa gcagtgtcac tagtttttcc taaaaaaaaa
     2521 aaaaaaaaaa aaa
//