LOCUS BC005056 1196 bp mRNA linear HUM 19-JUN-2008
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 30, mRNA
(cDNA clone MGC:12943 IMAGE:2823228), complete cds.
ACCESSION BC005056
VERSION BC005056.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1196)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1196)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: a Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538496.
FEATURES Location/Qualifiers
source 1..1196
/db_xref="H-InvDB:HIT000032188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12943 IMAGE:2823228"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1196
/gene="DNAJC30"
/db_xref="GeneID:84277"
/db_xref="HGNC:HGNC:16410"
CDS 20..700
/gene="DNAJC30"
/codon_start=1
/product="DnaJ (Hsp40) homolog, subfamily C, member 30"
/protein_id="AAH05056.1"
/db_xref="GeneID:84277"
/db_xref="HGNC:HGNC:16410"
/translation="MAAMRWRWWQRLLPWRLLQARGFPQNSAPSLGLRARTYSQGDCS
YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLG
SATLRRKYDRGLLSDEDLRGPGVRPSRTPAPDPGSPRTPPPTSRTHDGSRASPGANRT
MFNFDAFYQAHYGEQLERERRLRARREALRKRQEYRSMKGLRWEDTRDTAAIFLIFSI
FIIIGFYI"
BASE COUNT 251 a 383 c 317 g 245 t
ORIGIN
1 cctgccgaat caattcaaca tggcagccat gcgctggcga tggtggcagc ggctgttacc
61 ttggaggttg ctgcaggccc gtggctttcc acaaaattct gcacccagcc tgggcctaag
121 agcgaggact tattcccagg gcgactgctc gtattcgcgc acggcgctgt atgatctgct
181 cggcgtcccc tccacagcca cgcaggccca aatcaaggcg gcttactacc gtcagtgctt
241 tctctaccac ccggaccgca actccgggag cgcggaggcc gccgagcgct tcacgcgcat
301 ctcccaggcc tacgtggtgc tgggcagtgc caccctccgt cgcaagtatg atcgcggcct
361 actcagcgac gaggacctgc gcggacctgg cgtccggccc tccaggacgc ccgcacccga
421 ccccggctcg ccgcgtaccc cgccgcccac ctctcggacc cacgacggtt ctcgggcctc
481 ccccggcgcc aaccgcacga tgttcaactt tgacgccttc taccaggccc actacgggga
541 acaactggag cgggaacggc gcctgagggc ccggcgggag gcccttcgca aacggcagga
601 gtatcggtcc atgaaaggcc tccgctggga ggatacccga gacacggctg ccattttcct
661 catcttttca atcttcatca tcatcggctt ttatatttaa tcggagagag aagggaaggg
721 gagtgtcccc agccaacccc ccagaaacgg ccttttttcc tgcctctgaa cccttggccg
781 ttgatagtct acctttgctg ggatccgaag gaactgtact ccccctgccc tccccgaccc
841 gcccagctta gccgatgacc tgcacatcgc tccactgtgg tccagaaaag gaggcctttc
901 gatgtctgag aaagaggccc cacgctgtag agtcccgaaa gcccaggagt gaagggggtt
961 cctggagtct ctagggtgct tcttccagag tctgtcttct tgcttccaga tgtggtcaac
1021 ttctggaaca ctcgctgtag ctttattgtt tagccccaag caagatttat ctcctcctgc
1081 cccgcatgtg tatggtgggc ctctgtaacc ttgaaatgtg caatgtgacc aattgttgac
1141 taccaaaaga aaaggtctgg ggttgtacga aaaaaaaaaa aaaaaaaaaa aaaaaa
//