LOCUS BC005047 2212 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens dual specificity phosphatase 6, mRNA (cDNA clone
MGC:12852 IMAGE:3954486), complete cds.
ACCESSION BC005047
VERSION BC005047.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2212)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2212)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: m Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42764682.
FEATURES Location/Qualifiers
source 1..2212
/db_xref="H-InvDB:HIT000032181"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12852 IMAGE:3954486"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2212
/gene="DUSP6"
/gene_synonym="MKP3"
/gene_synonym="PYST1"
/db_xref="GeneID:1848"
/db_xref="HGNC:HGNC:3072"
/db_xref="MIM:602748"
CDS 425..1570
/gene="DUSP6"
/gene_synonym="MKP3"
/gene_synonym="PYST1"
/codon_start=1
/product="dual specificity phosphatase 6"
/protein_id="AAH05047.1"
/db_xref="GeneID:1848"
/db_xref="HGNC:HGNC:3072"
/db_xref="MIM:602748"
/translation="MIDTLRPVPFASEMAISKTVAWLNEQLELGNERLLLMDCRPQEL
YESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGTDTVVLYDESS
SDWNENTGGESVLGLLLKKLKDEGCRAFYLEGGFSKFQAEFSLHCETNLDGSCSSSSP
PLPVLGLGGLRISSDSSSDIESDLDRDPNSATDSDGSPLSNSQPSFPVEILPFLYLGC
AKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFFPEAI
SFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNF
NFMGQLLDFERTLGLSSPCDNRVPAQQLYFTTPSNQNVYQVDSLQST"
BASE COUNT 533 a 569 c 586 g 524 t
ORIGIN
1 gctgagtcca agagatagca aatcgagtct taaataatcc ggggagaaag acgcccgggt
61 agatttgagg tgcagccttg gagggaggga ttagaagccg ctagactttt tttcctcccc
121 tctcagtagc acggagtccg aattaattgg atttcattca ctggggagga acaaaaacta
181 tctgggcagc ttcattgaga gagattcatt gacactaaga gccagcggct gcagctgggt
241 gcagagagaa cctccggctt tacttctgtc tcgtctgccc caaccgctag cctcggcttg
301 ggtaaggcga ggcggaatta aaccccgctc cgagagcggc agcttcgcgc gcggtgcgct
361 cggcctatgc ctgccccgag gggcgtctgg taggcacccc gccctctccc gcagctcgac
421 ccccatgata gatacgctca gacccgtgcc cttcgcgtcg gaaatggcga tcagcaagac
481 ggtggcgtgg ctcaacgagc agctggagct gggcaacgag cggctgctgc tgatggactg
541 ccggccgcag gagctatacg agtcgtcgca catcgagtcg gccatcaacg tggccatccc
601 gggcatcatg ctgcggcgcc tgcagaaggg taacctgccg gtgcgcgcgc tcttcacgcg
661 cggcgaggac cgggaccgct tcacccggcg ctgtggcacc gacacagtgg tgctctacga
721 cgagagcagc agcgactgga acgagaatac gggcggcgag tcggtgctcg ggctgctgct
781 caagaagctc aaggacgagg gctgccgggc gttctacctg gaaggtggct tcagtaagtt
841 ccaagccgag ttctccctgc attgcgagac caatctagac ggctcgtgta gcagcagctc
901 gccgccgttg ccagtgctgg ggctcggggg cctgcggatc agctctgact cttcctcgga
961 catcgagtct gaccttgacc gagaccccaa tagtgcaaca gactcggatg gtagtccgct
1021 gtccaacagc cagccttcct tcccagtgga gatcttgccc ttcctctact tgggctgtgc
1081 caaagactcc accaacttgg acgtgttgga ggaattcggc atcaagtaca tcttgaacgt
1141 cacccccaat ttgccgaatc tctttgagaa cgcaggagag tttaaataca agcaaatccc
1201 catctcggat cactggagcc aaaacctgtc ccagtttttc cctgaggcca tttctttcat
1261 agatgaagcc cggggcaaga actgtggtgt cttggtacat tgcttggctg gcattagccg
1321 ctcagtcact gtgactgtgg cttaccttat gcagaagctc aatctgtcga tgaacgatgc
1381 ctatgacatt gtcaaaatga aaaaatccaa catatcccct aacttcaact tcatgggtca
1441 gctgctggac ttcgagagga cgctgggact cagcagccca tgtgacaaca gggttccagc
1501 acagcagctg tattttacca ccccttccaa ccagaatgta taccaggtgg actctctgca
1561 atctacgtga aagaccccac acccctcctt gctggaatgt gtctggccct tcagcagttt
1621 ctcttggcag catcagctgg gctgctttct ttgtgtgtgg ccccaggtgt caaaatgaca
1681 ccagctgtct gtactagaca aggttaccaa gtgcggaatt ggttaatact aacagagaga
1741 tttgctccat tctctttgga ataacaggac atgctgtata gatacaggca gtaggtttgc
1801 tctgtaccca tgtgtacagc ctacccatgc agggactggg attcgaggac ttccaggcgc
1861 atagggtaga accaaatgat agggtaggag catgtgttct ttagggcctt gtaaggctgt
1921 ttccttttgc atctggaact gactatataa ttgtcttcaa tgaagactaa ttcaattttg
1981 catatagagg agccaaagag agatttcagc tctgtatttg tggtatcagt ttggaaaaaa
2041 aatctgatac tccatttgat tattgtaaat atttgatctt gaatcacttg acagtgtttg
2101 tttgaattgt gtttgttttt tcctttgatg ggcttaaaag aaattatcca aagggagaaa
2161 gagcagtatg ccacttctta aaacagaaca aaacaaaaaa aaaaaaaaaa aa
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