LOCUS BC005039 1633 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens FUS interacting protein (serine/arginine-rich) 1, mRNA
(cDNA clone MGC:12764 IMAGE:3531441), complete cds.
ACCESSION BC005039
VERSION BC005039.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1633)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1633)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: e Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16905515.
FEATURES Location/Qualifiers
source 1..1633
/db_xref="H-InvDB:HIT000032175_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12764 IMAGE:3531441"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1633
/gene="FUSIP1"
/gene_synonym="NSSR"
/gene_synonym="SFRS13"
/gene_synonym="SRp38"
/gene_synonym="SRrp40"
/gene_synonym="TASR"
/gene_synonym="TASR1"
/gene_synonym="TASR2"
/db_xref="GeneID:10772"
/db_xref="HGNC:HGNC:16713"
/db_xref="MIM:605221"
CDS 65..853
/gene="FUSIP1"
/gene_synonym="NSSR"
/gene_synonym="SFRS13"
/gene_synonym="SRp38"
/gene_synonym="SRrp40"
/gene_synonym="TASR"
/gene_synonym="TASR1"
/gene_synonym="TASR2"
/codon_start=1
/product="FUS interacting protein (serine/arginine-rich)
1"
/protein_id="AAH05039.1"
/db_xref="GeneID:10772"
/db_xref="HGNC:HGNC:16713"
/db_xref="MIM:605221"
/translation="MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD
FYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGR
NVYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNSRPTGRPRRSRSHS
DNDRFKHRNRSFSRSKSNSRSRSKSQPKKEMKAKSRSRSASHTKTRGTSKTDSKTHYK
SGSRYEKESRKKEPPRSKSQSRSQSRSRSKSRSRSWTSPKSSGH"
BASE COUNT 499 a 343 c 373 g 418 t
ORIGIN
1 gccgcctgag ccgcggacgg tttgctgagc ccgttagtgc gcccggccga gacacgccgc
61 cgccatgtcc cgctacctgc gtccccccaa cacgtctctg ttcgtcagga acgtggccga
121 cgacaccagg tctgaagact tgcggcgtga atttggtcgt tatggtccta tagttgatgt
181 gtatgttcca cttgatttct acactcgccg tccaagagga tttgcttatg ttcaatttga
241 ggatgttcgt gatgctgaag acgctttaca taatttggac agaaagtgga tttgtggacg
301 gcagattgaa atacagtttg cccaggggga tcgaaagaca ccaaatcaga tgaaagccaa
361 ggaagggagg aatgtgtaca gttcttcacg ctatgatgat tatgacagat acagacgttc
421 tagaagccga agttatgaaa ggaggagatc aagaagtcgg tcttttgatt acaactatag
481 aagatcgtat agtcctagaa acagtagacc gactggaaga ccacggcgta gcagaagcca
541 ttccgacaat gatagattca aacaccgaaa tcgatctttt tcaagatcta aatccaattc
601 aagatcacgg tccaagtccc agcccaagaa agaaatgaag gctaaatcac gttctaggtc
661 tgcatctcac accaaaacta gaggcacctc taaaacagat tccaaaacac attataagtc
721 tggctcaaga tatgaaaagg aatcaaggaa aaaagaacca cctagatcca aatctcagtc
781 aagatcacag tctaggtcta ggtcaaaatc tagatcaagg tcttggacta gtcctaagtc
841 cagtggccac tgatagtata aaccatggtc atttttaggc atgtatcatt catttactca
901 tagtttggtt tacttaaatt atcaggaata caatgttgca atgatgctta aaaaacactt
961 gttagttttc cctgtaccag gcaatggtta taattaaaat gatatgctgt tgagaagcca
1021 ctcttaagag tccagtttgt ttaatgttat gggcagctac caatttgtgg tgtctctgta
1081 tatttttgta aagattctca ttttttatgc ttgaagtatt tggtgaaaag atgttggttg
1141 accataattt gcaacattgt ctcattaaaa ataaactttc atattcatat ttggtagaac
1201 tgttaaccta gaaatgtagc ttgctaataa gatagaatga tacaaaagtg aagcagtagc
1261 cacagtacaa cactgactgc tcagacacat ttaggttcag ggtggacctt tatgtcttgt
1321 caagatgtct aggcccggct gggcgtggtg gctcacacct gtaatcccag cactttggga
1381 ggccgaggcg ggcggatcac gaggtcagga gttcgagacc agcctgacca acacggtgaa
1441 accccgtctc tactaaaaat acaaaaatta tccgggcatg gtggcacatg cctgtaatct
1501 cagctactca ggaggctgag gcaagagaat cgcttgaacc tgggaggtag aagttgcagt
1561 gagccaaaat cacgccactg cactccagcc tgggcaacag agtgagactc cgtctcaaaa
1621 aaaaaaaaaa aaa
//