LOCUS BC005033 3504 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens actinin, alpha 4, mRNA (cDNA clone MGC:12692 IMAGE:3842046), complete cds. ACCESSION BC005033 VERSION BC005033.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3504) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3504) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 18 Row: k Column: 19. FEATURES Location/Qualifiers source 1..3504 /db_xref="H-InvDB:HIT000032172" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12692 IMAGE:3842046" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3504 /gene="ACTN4" /gene_synonym="FSGS" /gene_synonym="FSGS1" /db_xref="GeneID:81" /db_xref="HGNC:HGNC:166" /db_xref="MIM:604638" CDS 14..2749 /gene="ACTN4" /gene_synonym="FSGS" /gene_synonym="FSGS1" /codon_start=1 /product="actinin, alpha 4" /protein_id="AAH05033.1" /db_xref="GeneID:81" /db_xref="HGNC:HGNC:166" /db_xref="MIM:604638" /translation="MVDYHAANQSYQYGPSSAGNGAGGGGSMGDYMAQEDDWDRDLLL DPAWEKQQRKTFTAWCNSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPERG KMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISV EETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKD DPVTNLNNAFEVAEKYLDIPKMLDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAET AANRICKVLAVNQENEHLMEDYEKLASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLED FRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNGWQHLEQ AEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLKHRDYETATLSDIK ALIRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSHNVNTRCQKICDQWDALGSL THSRREALEKTEKQLEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGL ISAHDQFKSTLPDADREREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWE KVQQLVPKRDHALLEEQSKQQSNEHLRRQFASQANVVGPWIQTKMEEIGRISIEMNGT LEDQLSHLKQYERSIVDYKPNLDLLEQQHQLIQEALIFDNKHTNYTMEHIRVGWEQLL TTIARTINEVENQILTRDAKGISQEQMQEFRASFNHFDKDHGGALGPEEFKACLISLG YDVENDRQGEAEFNRIMSLVDPNHSGLVTFQAFIDFMSRETTDTDTADQVIASFKVLA GDKNFITAEELRRELPPDQAEYCIARMAPYQGPDAVPGALDYKSFSTALYGESDL" BASE COUNT 880 a 1076 c 1001 g 547 t ORIGIN 1 gagaggcggc ggaatggtgg actaccacgc ggcgaaccag tcgtaccagt acggccccag 61 cagcgcgggc aatggcgctg gcggcggggg cagcatgggc gactacatgg cccaggagga 121 cgactgggac cgggacctgc tgctggaccc ggcctgggag aagcagcagc gcaagacctt 181 cacggcatgg tgcaactccc acctgcggaa ggcaggcaca cagatcgaga acattgatga 241 ggacttccga gacgggctca agctcatgct gctcctggag gtcatatcag gggagcggtt 301 acctaagccg gagcggggga agatgagagt gcacaaaatc aacaatgtga acaaagcgct 361 ggactttatt gccagcaaag gcgtcaagct ggtctccatc ggggcagaag agattgtgga 421 cggcaacgca aagatgaccc tgggaatgat ctggaccatc atccttaggt tcgccatcca 481 ggacatctcc gtggaagaga cctcggccaa ggaagggctc cttctctggt gccagagaaa 541 gacagccccg tataagaacg tcaatgtgca gaacttccac atcagctgga aggatggtct 601 tgccttcaat gccctgatcc accggcacag accagagctg attgagtatg acaagctgag 661 gaaggacgac cctgtcacca acctgaacaa tgccttcgaa gtggctgaga aatacctcga 721 catccccaag atgctggatg cagaggacat cgtgaacacg gcccggcccg acgagaaggc 781 cataatgacc tatgtgtcca gcttctacca tgccttttca ggagcgcaga aggctgaaac 841 tgccgccaac cggatctgta aggtgctggc tgtcaaccaa gagaacgagc acctgatgga 901 ggactacgag aagctggcca gcgacctcct ggagtggatc cggcgcacca tcccctggct 961 ggaggaccgt gtgccccaaa agactatcca ggagatgcag cagaagctgg aggacttccg 1021 cgactaccgg cgtgtgcaca agccgcccaa ggtgcaggag aagtgccagc tggagatcaa 1081 cttcaacacg ctgcagacca agctgcgcct cagcaaccgg cccgccttca tgccctccga 1141 gggcaagatg gtctcggaca tcaacaatgg ctggcagcac ttggagcagg ctgagaaggg 1201 ctacgaggag tggctgctga atgagatccg caggctggag cggctcgacc acctggcaga 1261 gaagttccgg cagaaggcct ccatccacga ggcctggact gacgggaagg aagccatgct 1321 gaagcaccgg gactacgaga cggccacact atcggacatc aaagccctca ttcgcaagca 1381 cgaggccttc gagagcgacc tggctgcgca ccaggaccgc gtggagcaga tcgccgccat 1441 tgcccaggag ctcaacgagc tggattacta cgactcccac aatgtcaaca cccggtgcca 1501 gaagatctgt gaccagtggg acgccctcgg ctctctgaca catagtcgca gggaagccct 1561 ggagaaaaca gagaagcagc tggaggccat cgaccagctg cacctggaat acgccaagcg 1621 cgcggccccc ttcaacaact ggatggagag cgccatggag gacctccagg acatgttcat 1681 cgtccatacc atcgaggaga ttgagggcct gatctcagcc catgaccagt tcaagtccac 1741 cctgccggac gccgataggg agcgcgaggc catcctggcc atccacaagg aggcccagag 1801 gatcgctgag agcaaccaca tcaagctgtc gggcagcaac ccctacacca ccgtcacccc 1861 gcaaatcatc aactccaagt gggagaaggt gcagcagctg gtgccaaaac gggaccatgc 1921 cctcctggag gagcagagca agcagcagtc caacgagcac ctgcgccgcc agttcgccag 1981 ccaggccaat gttgtggggc cctggatcca gaccaagatg gaggagatcg ggcgcatctc 2041 cattgagatg aacgggaccc tggaggacca gctgagccac ctgaagcagt atgaacgcag 2101 catcgtggac tacaagccca acctggacct gctggagcag cagcaccagc tcatccagga 2161 ggccctcatc ttcgacaaca agcacaccaa ctataccatg gagcacatcc gcgtgggctg 2221 ggagcagctg ctcaccacca ttgcccgcac catcaacgag gtggagaacc agatcctcac 2281 ccgcgacgcc aagggcatca gccaggagca gatgcaggag ttccgggcgt ccttcaacca 2341 cttcgacaag gatcatggcg gggcgctggg gcccgaggag ttcaaggcct gcctcatcag 2401 cctgggctac gacgtggaga acgaccggca gggtgaggcc gagttcaacc gcatcatgag 2461 cctggtcgac cccaaccata gcggccttgt gaccttccaa gccttcatcg acttcatgtc 2521 gcgggagacc accgacacgg acacggctga ccaggtcatc gcttccttca aggtcttagc 2581 aggggacaag aacttcatca cagctgagga gctgcggaga gagctgcccc ccgaccaggc 2641 cgagtactgc atcgcccgca tggcgccata ccagggccct gacgccgtgc ccggtgccct 2701 cgactacaag tccttctcca cggccttgta tggcgagagc gacctgtgag gccccagaga 2761 cctgacccaa cacccccgac ggcctccagg aggggcctgg gcagccccac agtcccattc 2821 ctccactctg tatctatgca aagcactctc tgcagtcctc cggggtgggt gggtgggcag 2881 ggaggggctg gggcaggctc tctcctctct ctctttgtgg gttggccagg aggttccccc 2941 gaccaggttg gggagacttg gggccagcgc ttctggtctg gtaaatatgt atgatgtgtt 3001 gtgctttttt aaccaaggag gggccagtgg attcccacag cacaaccggt cccttccatg 3061 ccctgggatg cctcaccaca cccaggtctc ttcctttgct ctgaggtccc ttcaaggcct 3121 ccccaatcca ggccaaagcc ccatgtgcct tgtccaggaa ctgcctgggc catgcgaggg 3181 gccagcagag ggcgccacca ccacctgacg gctggggacc cacccagccc ctctcccctc 3241 tctgctccag actcacttgc cattgccagg agatggcccc aacaagcacc ccgcttttgc 3301 agcagaggag ctgagttggc agaccgggcc cccctgaacc gcaccccatc ccaccagccc 3361 cggccttgct ttgtctggcc tcacgtgtct cagattttct aagaaccaaa aaaaaaaaag 3421 gaaaaaaaac acaaaacaac aaaaaccaaa aaaaaaaaaa atcacaaaaa aaaaaaaaaa 3481 aaaaaaaaaa aaaaaaaaaa aaac //