LOCUS BC005032 2702 bp mRNA linear HUM 21-SEP-2006
DEFINITION Homo sapiens Sec23 homolog B (S. cerevisiae), mRNA (cDNA clone
MGC:12666 IMAGE:3607346), complete cds.
ACCESSION BC005032
VERSION BC005032.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2702)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2702)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: g Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66932900.
FEATURES Location/Qualifiers
source 1..2702
/db_xref="H-InvDB:HIT000032171"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12666 IMAGE:3607346"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2702
/gene="SEC23B"
/db_xref="GeneID:10483"
/db_xref="HGNC:HGNC:10702"
CDS 104..2407
/gene="SEC23B"
/codon_start=1
/product="Sec23 homolog B (S. cerevisiae)"
/protein_id="AAH05032.1"
/db_xref="GeneID:10483"
/db_xref="HGNC:HGNC:10702"
/translation="MATYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPLACLLTP
LKERPDLPPVQYEPVLCSRPTCKAVLNPLCQVDYRAKLWACNFCFQRNQFPPAYGGIS
EVNQPAELMPQFSTIEYVIQRGAQSPLIFLYVVDTCLEEDDLQALKESLQMSLSLLPP
DALVGLITFGRMVQVHELSCEGISKSYVFRGTKDLTAKQIQDMLGLTKPAMPMQQARP
AQPQEHPFASSRFLQPVHKIDMNLTDLLGELQRDPWPVTQGKRPLRSTGVALSIAVGL
LEGTFPNTGARIMLFTGGPPTQGPGMVVGDELKIPIRSWHDIEKDNARFMKKATKHYE
MLANRTAANGHCIDIYACALDQTGLLEMKCCANLTGGYMVMGDSFNTSLFKQTFQRIF
TKDFNGDFRMAFGATLDVKTSRELKIAGAIGPCVSLNVKGPCVSENELGVGGTSQWKI
CGLDPTSTLGIYFEVVNQHNTPIPQGGRGAIQFVTHYQHSSTQRRIRVTTIARNWADV
QSQLRHIEAAFDQEAAAVLMARLGVFRAESEEGPDVLRWLDRQLIRLCQKFGQYNKED
PTSFRLSDSFSLYPQFMFHLRRSPFLQVFNNSPDESSYYRHHFARQDLTQSLIMIQPI
LYSYSFHGPPEPVLLDSSSILADRILLMDTFFQIVIYLGETIAQWRKAGYQDMPEYEN
FKHLLQAPLDDAQEILQARFPMPRYINTEHGGSQARFLLSKVNPSQTHNNLYAWGQET
GAPILTDDVSLQVFMDHLKKLAVSSAC"
BASE COUNT 705 a 616 c 639 g 742 t
ORIGIN
1 gctgagctgg acttggcggt gggagccgga gcctgcttgt tgcagctgtg ggtgaggacg
61 gctctagcta ggtgagcggc tccggccagt tcccttttag actatggcga catacctgga
121 gttcatccag cagaatgaag aacgggatgg tgtgcgtttt agttggaacg tgtggccttc
181 cagccggctg gaggctacaa gaatggttgt acccctggct tgtctcctta ctcctttgaa
241 agaacgtcca gacctacctc ctgtacaata tgaacctgtg ctttgcagca ggccaacttg
301 taaagctgtt ctcaacccac tttgtcaggt tgattatcga gcaaaacttt gggcctgtaa
361 tttctgtttt caaagaaatc agtttcctcc agcttatgga ggcatatctg aggtgaatca
421 acctgccgaa ttgatgcccc agttttctac aattgagtac gtgatacagc gaggtgctca
481 gtcccctctg atctttctct atgtggttga cacatgcctg gaggaagatg accttcaagc
541 actcaaagag tccctgcaga tgtccctgag tcttcttcct ccagatgctc tggtgggtct
601 gatcacattt ggaaggatgg tgcaggttca tgagctaagc tgtgaaggaa tctccaaaag
661 ttatgtcttc cgagggacca aggatttaac tgcaaagcaa atacaggata tgttgggcct
721 gaccaagcca gccatgccca tgcagcaagc acgacctgca caaccacagg agcacccttt
781 tgcttcaagc agatttctgc agcctgttca caagattgat atgaacctca ctgatcttct
841 tggggagcta cagagggacc catggccagt aactcagggg aagagacctt tgcgatccac
901 tggtgtggct ttgtccattg ctgttggctt gctggagggc acttttccaa acacaggagc
961 caggatcatg ctgtttactg gaggtccccc tacccaaggg cctggcatgg tggttggaga
1021 tgaattaaag attcctattc gttcttggca tgatattgag aaagataatg cacgattcat
1081 gaaaaaggca accaagcact atgagatgct tgctaatcga acagctgcaa atggtcactg
1141 cattgatatt tatgcttgtg cccttgatca aactggactt ttggagatga agtgttgtgc
1201 aaatcttact ggaggctaca tggtaatggg agattctttc aacacttctc tcttcaagca
1261 gacattccaa agaatcttta ctaaagattt taatggagat ttccgaatgg catttggtgc
1321 tactttggac gtaaagacct ctcgggaact gaagattgca ggagccattg gtccatgcgt
1381 atctctgaat gtgaaaggac cgtgtgtgtc agaaaatgag cttggtgttg gtggcacgag
1441 tcagtggaaa atctgtggcc tagatcctac atctacactt ggcatctatt ttgaagttgt
1501 caatcagcac aacaccccga tcccccaagg aggcagagga gccatccagt ttgtcacgca
1561 ttatcagcac tccagcaccc agagacgcat ccgcgtgacc accatcgccc gaaattgggc
1621 agatgtacag agtcagctca ggcacataga agcagcattt gaccaggagg ctgcggcagt
1681 gttgatggca cggcttgggg tgttccgagc ggagtcagag gaggggcccg atgtgctccg
1741 gtggctggac cgacaactca tccgactgtg tcaaaagttt ggacagtata acaaagaaga
1801 ccccacttct tttaggttat cagattcctt ttctctatat cctcagttta tgttccatct
1861 gagaagatct ccatttcttc aagtgtttaa caacagtcct gatgagtcgt catattacag
1921 acatcatttt gcccggcagg acctgaccca gtccctcatc atgatccagc ccattctcta
1981 ctcttactcc tttcatgggc caccagagcc agtactcttg gatagcagca gcattctagc
2041 tgacagaatt ttgctgatgg atactttctt tcaaattgtc atttatcttg gtgagaccat
2101 agcccagtgg cgtaaagctg gctaccagga catgcccgag tatgaaaact tcaagcacct
2161 tctgcaggca ccactggatg atgctcaaga aattctgcaa gcacgcttcc cgatgccacg
2221 ttacatcaac acggagcatg gaggcagtca ggctcgattc cttttgtcca aagtgaaccc
2281 atctcagaca cacaataacc tgtatgcttg gggacaggaa actggagcac ccatcctaac
2341 tgatgatgtt agcctgcagg tgttcatgga ccatttgaag aagctggctg tctccagtgc
2401 ctgttaagct gaggatacaa ccaggaaatg caacggtgtc agattgtgtt caaaatgtct
2461 agaaaggctt gataacattc ctgttacttt tctagcagat tttaacaaat aatcaaggac
2521 attttatatg taactcttta gattataatt tatttgtatt cctgtctttg tcctttttct
2581 tgcactataa aattataagg tcataaatgt tttggtactt gtagatgttt atgtgctttt
2641 tgtatcctaa cttttagaat ctaaataaaa tcagaggtaa tgtaaaaaaa aaaaaaaaaa
2701 aa
//