LOCUS BC005025 3440 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens pitrilysin metallopeptidase 1, mRNA (cDNA clone
MGC:12568 IMAGE:4040225), complete cds.
ACCESSION BC005025
VERSION BC005025.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3440)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3440)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: o Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41352060.
FEATURES Location/Qualifiers
source 1..3440
/db_xref="H-InvDB:HIT000032166"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12568 IMAGE:4040225"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3440
/gene="PITRM1"
/gene_synonym="hMP1"
/gene_synonym="KIAA1104"
/gene_synonym="MP1"
/db_xref="GeneID:10531"
/db_xref="HGNC:HGNC:17663"
CDS 5..3118
/gene="PITRM1"
/gene_synonym="hMP1"
/gene_synonym="KIAA1104"
/gene_synonym="MP1"
/codon_start=1
/product="pitrilysin metallopeptidase 1"
/protein_id="AAH05025.1"
/db_xref="GeneID:10531"
/db_xref="HGNC:HGNC:17663"
/translation="MWRCGGRRGLCVLRRLSGGHAHHRAWRWNSNRACERALQYKLGD
KIHGFTVNQVTSVPELFLTAVKLTHDDTGARYLHLAREDTNNLFSVQFRTTPMDSTGV
PHILEHTVLCGSQKYPCRDPFFKMLNRSLSTFMNAFTASDYTLYPFSTQNPKDFQNLL
SVYLDATFFPCLRELDFWQEGWRLEHENPSDPQTPLVFKGVVFNEMKGAFTDNERIFS
QHLQNRLLPDHTYSVVSGGDPLCIPELTWEQLKQFHATHYHPSNARFFTYGNFPLEQH
LKQIHEEALSKFQKIEPSTVVPAQTPWDKPREFQITCGPDSFATDPSKQTTVSVSFLL
PDITDTFEAFTLSLLSSLLTSGPNSPFYKALIESGLGTDFSPDVGYNGYTREAYFSVG
LQGIVEKDIETVRSLIDRTIDEVVEKGFEDDRIEALLHKIEIQMKHQSTSFGLMLTSY
IASCWNHDGDPVELLKLGNQLAKFRQCLQENPKFLQEKVKQYFKNNQHKLTLSMRPDD
KYHEKQAQVEATKLKQKVEALSPGDRQQIYEKGLELRSQQSKPQDASCLPALKVSDIE
PTIPVTELDVVLTAGDIPVQYCAQPTNGMVYFRAFSSLNTLPEELRPYVPLFCSVLTK
LGCGLLDYREQAQQIELKTGGMSASPHVLPDDSHMDTYEQGVLFSSLCLDRNLPDMMQ
LWSEIFNNPCFEEEEHFKVLVKMTAQELANGIPDSGHLYASIRAGRTLTPAGDLQETF
SGMDQVRLMKRIAEMTDIKPILRKLPRIKKHLLNGDNMRCSVNATPQQMPQTEKAVED
FLRSIGRSKKERRPVRPHTVEKPVPSSSGGDAHVPHGSQVIRKLVMEPTFKPWQMKTH
FLMPFPVNYVGECIRTVPYTDPDHASLKILARLMTAKFLHTEIREKGGAYGGGAKLSH
NGIFTLYSYRDPNTIETLQSFGKAVDWAKSGKFTQQDIDEAKLSVFSTIDAPVAPSDK
GMDHFLYGLSDEMKQAHREQLFAVSHDKLLAVSDRYLGTGKSTHGLAILGPENPKIAK
DPSWIIR"
BASE COUNT 944 a 885 c 835 g 776 t
ORIGIN
1 cgcaatgtgg cgctgcggcg ggcggcgggg cctgtgtgtg ctgaggcggc tgagcggcgg
61 acatgcacac cacagagcgt ggcgatggaa cagtaaccgg gcttgtgaga gggctctgca
121 gtataaacta ggagacaaga tccatggatt caccgtaaac caggtgacat ctgttcccga
181 gctgttcctg actgcagtga agctcaccca tgatgacaca ggagccaggt atttacacct
241 ggccagagaa gacacgaata atctgttcag cgtgcagttc cgtaccactc ccatggacag
301 tactggtgtt cctcacattc ttgagcatac cgtcctttgt gggtctcaga aatatccgtg
361 cagagaccct ttcttcaaaa tgttgaaccg gtccctctcc acgttcatga acgccttcac
421 agctagtgat tatactctgt atccattttc cacacaaaat cccaaggact ttcagaatct
481 cctctcggtg tatttggatg ccaccttttt cccatgttta cgcgagctgg atttctggca
541 ggaaggatgg cggctggaac atgagaatcc gagcgacccc cagacgccct tggtctttaa
601 aggagtcgtc tttaatgaga tgaagggagc gtttacagac aatgagagga tattctccca
661 gcaccttcag aacagacttc ttcccgacca cacgtactca gtggtctccg ggggtgaccc
721 actgtgcatc ccggagctta catgggagca gcttaagcag tttcatgcca ctcactatca
781 cccaagcaat gctaggttct tcacgtacgg taattttcca ttagaacagc atctgaaaca
841 aattcacgag gaagcactga gcaaattcca gaaaattgaa ccaagcaccg tggtgccagc
901 tcagacaccc tgggacaagc ctagggaatt ccagataaca tgtggcccgg attcatttgc
961 tacagatccc tctaaacaaa caaccgtcag cgttagcttc ctcttaccgg acatcaccga
1021 cacatttgaa gccttcacat taagtcttct gtcttcactc ttgacttctg ggcccaattc
1081 tcccttttac aaagccttga ttgaatctgg ccttggcaca gacttttctc ctgatgttgg
1141 atataatggc tacacgaggg aggcctactt tagtgtcggc ctccaaggga ttgtggagaa
1201 agacattgag accgtcagaa gcctcataga cagaacgatt gatgaagtag ttgagaaagg
1261 atttgaagat gatcgaattg aggctttact tcataaaatt gaaatacaga tgaaacatca
1321 gtctaccagc tttgggctga tgctgacatc atacatagct tcttgctgga accatgatgg
1381 ggaccctgtg gagctcttga agttgggaaa tcagttagct aaattcagac agtgcctgca
1441 ggaaaatcca aaatttttgc aagaaaaagt aaaacagtat tttaagaata accagcataa
1501 gctgacttta tcgatgaggc cagatgacaa gtatcacgag aagcaggcac aggtggaagc
1561 cacgaagctc aagcagaagg tcgaggctct gtcccccgga gacaggcagc agatctacga
1621 gaaaggtcta gaattacgga gtcaacaaag caaacctcaa gatgcctctt gtctgccagc
1681 gttgaaagtt tccgatattg aacccaccat acctgtcaca gagttggacg tggtcctgac
1741 agctggagat atccctgttc agtactgcgc ccagcccacc aatggcatgg tgtatttccg
1801 ggccttctcc agcctgaaca cactccccga ggagctgagg ccctatgtgc ccctcttctg
1861 cagcgtcctc accaagctgg gctgcggcct tcttgactac cgggagcagg ctcagcagat
1921 agaattgaag accggaggga tgagtgcttc tccccacgtg ctccccgacg actcacacat
1981 ggacacctac gagcagggtg tgcttttctc ctctctctgc ctggatcgaa acctgccaga
2041 catgatgcag ctatggagtg aaatatttaa caacccgtgc tttgaagaag aggagcactt
2101 caaggtgctg gtgaagatga ccgcccagga gctcgccaat ggaattcctg actctgggca
2161 cctgtacgca tccatcaggg caggccggac cctcacgccc gcaggggacc tgcaggagac
2221 cttcagcggg atggatcagg tgcggctgat gaagaggatt gcagaaatga cagatatcaa
2281 acccatcctg aggaagctcc cacgtatcaa gaaacacttg ttaaatggtg ataatatgag
2341 gtgttcagtg aatgcgactc ctcagcagat gcctcagaca gaaaaagcgg tcgaagactt
2401 ccttagaagc atcggtcgga gtaaaaagga acggaggcct gtgcgcccac acacggtcga
2461 gaaacctgtg cccagcagct ctggtggaga tgcccacgtt ccccatggct cccaggtcat
2521 taggaagctg gtcatggaac ccaccttcaa gccctggcag atgaagactc acttcctgat
2581 gcccttcccg gtgaattacg tgggtgaatg catccgaact gtcccctaca cggacccaga
2641 tcatgccagt cttaaaatcc ttgcacgttt gatgactgcc aaattcttgc atacagaaat
2701 tcgagaaaaa ggcggtgctt atggtggagg cgcaaaactc agccacaatg ggattttcac
2761 cctttactct tacagggacc caaatacaat agagacgctc cagtcttttg ggaaggctgt
2821 cgactgggct aagtctggaa aattcacaca gcaagacatc gacgaagcca aactttctgt
2881 cttctcaacc atagatgctc ctgtcgctcc ttcagacaaa ggaatggacc acttcttgta
2941 cggcctctcg gatgagatga agcaggccca cagagagcag ctctttgctg tcagccacga
3001 caagctcctg gccgtgagcg ataggtacct cggcactggg aagagcacac acggcctggc
3061 catcctcgga cccgagaacc cgaaaattgc caaggaccca tcctggatca tccgatgagc
3121 agccgtggcg ctcgactgca caggagcccg agacaataca cctccgagct gaatatgaaa
3181 agtcagaaat gctactgctt tttccaagaa tattatgtca ttgagtgtcg ccaaagccct
3241 tgactggcga gtcaaaaact cagatctatc ttaagagtga ccaggaagag gttcattgaa
3301 ataatcatgc atgaagcgcc aaagatgcac catgtagaat tttcactttg tactggcagg
3361 ctcgttttac ctcattctag aatatttaag aatctaaaaa taaagggcaa ctctgactta
3421 acaaaaaaaa aaaaaaaaaa
//