LOCUS BC004967 1885 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens UBA domain containing 1, mRNA (cDNA clone MGC:2352
IMAGE:3535682), complete cds.
ACCESSION BC004967
VERSION BC004967.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1885)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1885)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: m Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8400726.
FEATURES Location/Qualifiers
source 1..1885
/db_xref="H-InvDB:HIT000032118"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2352 IMAGE:3535682"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1885
/gene="UBAC1"
/gene_synonym="GBDR1"
/gene_synonym="RP11-432J22.3"
/db_xref="GeneID:10422"
/db_xref="HGNC:HGNC:30221"
/db_xref="MIM:608129"
CDS 219..1436
/gene="UBAC1"
/gene_synonym="GBDR1"
/gene_synonym="RP11-432J22.3"
/codon_start=1
/product="UBA domain containing 1"
/protein_id="AAH04967.1"
/db_xref="GeneID:10422"
/db_xref="HGNC:HGNC:30221"
/db_xref="MIM:608129"
/translation="MFVQEEKIFAGKVLRLHICASDGAEWLEEATEDTSVEKLKERCL
KHCAHGSLEDPKSITHHKLIHAASERVLSDARTILEENIQDQDVLLLIKKRAPSPLPK
MADVSAEEKKKQDQKAPDKEAILRATANLPSYNMDRAAVQTNMRDFQTELRKILVSLI
EVAQKLLALNPDAVELFKKANAMLDEDEDERVDEAALRQLTEMGFPENRATKALQLNH
MSVPQAMEWLIEHAEDPTIDTPLPGQAPPEAEGATAAASEAAAGASATDEEARDELTE
IFKKIRRKREFRADARAVISLMEMGFDEKEVIDALRVNNNQQNAACEWLLGDRKPSPE
ELDKGIDPDSPLFQAILDNPVVQLGLTNPKTLLAFEDMLENPLNSTQWMNDPETGPVM
LQISRIFQTLNRT"
BASE COUNT 447 a 518 c 577 g 343 t
ORIGIN
1 ccgcgacggc gcgcccccgg cggctgctgc ggcggcggga gcgaggcgac cgctgaggcc
61 gcggagagtg acggcggccc ggccgacggg agccggggcg gggcggcggc ccagcgaagg
121 agcgcgcggg cggtctggcc ccgccccctc cccgcccgcc ttcccggtga ccttcagggg
181 cccgggtggc gggcgcaggc ccctgcggcg gcggcgggat gttcgtgcag gaggagaaga
241 tcttcgcggg caaggtgctg cggctgcaca tctgcgcgtc cgacggcgcc gagtggctgg
301 aggaggccac cgaggacacc tcggtggaga agctcaagga gcgctgcctc aagcactgtg
361 ctcatgggag cttagaagat cccaaaagta taacccatca taaattaatc cacgctgcct
421 cagagagggt gctgagtgat gccaggacca tcctggaaga gaacatccag gaccaagatg
481 tcctattatt gataaaaaag cgtgctccat caccacttcc caagatggct gatgtctcag
541 cagaagaaaa gaaaaaacaa gaccagaaag ctccagataa agaggccata ctgcgggcca
601 ccgccaacct gccctcctac aacatggacc gggccgcggt ccagaccaac atgagagact
661 tccagacaga actccggaag atactggtgt ctctcatcga ggtggcgcag aagctgttag
721 cgctgaaccc agatgcggtg gaattgttta agaaggcgaa tgcaatgctg gacgaggacg
781 aggatgagcg tgtggacgag gctgccctgc ggcagctcac ggagatgggc tttccggaga
841 acagagccac caaggccctt cagctgaacc acatgtcggt gcctcaggcc atggagtggc
901 taattgaaca cgcagaagac ccgaccatag acacgcctct tcctggccaa gctcccccag
961 aggccgaggg ggccacagca gctgcctccg aggctgccgc gggagccagc gccaccgatg
1021 aggaggccag agatgagctg acggaaatct tcaagaagat ccggaggaaa agggagtttc
1081 gggctgatgc tcgggccgtc atttccctga tggagatggg gttcgacgag aaagaggtga
1141 tagatgccct cagagtgaac aacaaccagc agaatgccgc gtgcgagtgg ctgctggggg
1201 accggaagcc ctctccggag gagctggaca agggcatcga ccccgacagt cctctctttc
1261 aggccatcct ggataacccg gtggtgcagc tgggcctgac caacccgaaa acattgctag
1321 catttgaaga catgctggag aacccactga acagcaccca gtggatgaat gatccagaaa
1381 cggggcctgt catgctgcag atctctagaa tcttccagac actaaatcgc acgtaggtgg
1441 cgttgttcca ctcggctatc aggccacagc agccccctgg tgcggcccga gaccgggcag
1501 agtggacctc acctggaaac tcaccttcag cgcctcagcc ctggactgtt agaggtgctg
1561 cagcggctcc tgctctctga tcttattgct tataaacttt ggtgacggta gtgtgtaagg
1621 ccgtattttt agcatctgac aggtgtttac aaaaaagtgg ttgtcgcact gggaagtgga
1681 gtgatggcct cgtctccagt gctcctctgg gctcttgagt tgctgcttga attgccgtgt
1741 agacatttgc ttggagagtc cacttgttat ttgacggagg taggtttcaa cccagagtta
1801 atgtcaagca tgctaattta actagtcact cacagatgac ttttctttaa taaagtccct
1861 tttcctaaaa aaaaaaaaaa aaaaa
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