LOCUS BC004954 743 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens ribosomal protein L13, mRNA (cDNA clone MGC:10897
IMAGE:3623320), complete cds.
ACCESSION BC004954
VERSION BC004954.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 743)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 743)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: o Column: 2.
FEATURES Location/Qualifiers
source 1..743
/db_xref="H-InvDB:HIT000032108"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10897 IMAGE:3623320"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..743
/gene="RPL13"
/gene_synonym="BBC1"
/gene_synonym="D16S444E"
/db_xref="GeneID:6137"
/db_xref="MIM:113703"
CDS 40..675
/gene="RPL13"
/gene_synonym="BBC1"
/gene_synonym="D16S444E"
/codon_start=1
/product="RPL13 protein"
/protein_id="AAH04954.1"
/db_xref="GeneID:6137"
/db_xref="MIM:113703"
/translation="MAPSRNGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKAR
RIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRR
RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNV
YKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAEQDVEKKK"
misc_feature 58..594
/gene="RPL13"
/gene_synonym="BBC1"
/gene_synonym="D16S444E"
/note="Ribosomal_L13e; Region: Ribosomal protein L13e"
/db_xref="CDD:pfam01294"
BASE COUNT 205 a 223 c 212 g 103 t
ORIGIN
1 ctgttttcct gcgcaggagc cgcagggccg taggcagcca tggcgcccag ccggaatggc
61 atggtcttga agccccactt ccacaaggac tggcagcggc gcgtggccac gtggttcaac
121 cagccggccc gtaagatccg cagacgtaag gcccggcaag ccaaggcgcg ccgcatcgcc
181 ccgcgccccg cgtcgggtcc catccggccc atcgtgcgct gccccacggt tcggtaccac
241 acgaaggtgc gcgccggccg cggcttcagc ctggaggagc tcagggtggc cggcattcac
301 aagaaggtgg cccggaccat cggcatttct gtggatccga ggaggcggaa caagtccacg
361 gagtccctgc aggccaacgt gcagcggctg aaggagtacc gctccaaact catcctcttc
421 cccaggaagc cctcggcccc caagaaggga gacagttctg ctgaagaact gaaactggcc
481 acccagctga ccggaccggt catgcccgtc cggaacgtct ataagaagga gaaagctcga
541 gtcatcactg aggaagagaa gaatttcaaa gccttcgcta gtctccgtat ggcccgtgcc
601 aacgcccggc tcttcggcat acgggcaaaa agagccaagg aagccgcaga acaggatgtt
661 gaaaagaaaa aataaagccc tcctggggac ttggaatcaa aaaaaaaaaa aaaaaaaaaa
721 aaaaaaaaaa aaaaaaaaaa aaa
//