LOCUS BC004927 1479 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens transgelin, mRNA (cDNA clone MGC:10432 IMAGE:3625512), complete cds. ACCESSION BC004927 VERSION BC004927.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1479) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1479) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 13 Row: k Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48255906. FEATURES Location/Qualifiers source 1..1479 /db_xref="H-InvDB:HIT000032090" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10432 IMAGE:3625512" /tissue_type="Uterus, endometrium adenocarcinoma" /clone_lib="NIH_MGC_44" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1479 /gene="TAGLN" /gene_synonym="SM22" /gene_synonym="SMCC" /gene_synonym="TAGLN1" /gene_synonym="WS3-10" /db_xref="GeneID:6876" /db_xref="HGNC:HGNC:11553" /db_xref="MIM:600818" CDS 449..1054 /gene="TAGLN" /gene_synonym="SM22" /gene_synonym="SMCC" /gene_synonym="TAGLN1" /gene_synonym="WS3-10" /codon_start=1 /product="transgelin" /protein_id="AAH04927.1" /db_xref="GeneID:6876" /db_xref="HGNC:HGNC:11553" /db_xref="MIM:600818" /translation="MANKGPSYGMSREVQSKIEKKYDEELEERLVEWIIVQCGPDVGR PDRGRLGFQVWLKNGVILSKLVNSLYPDGSKPVKVPENPPSMVFKQMEQVAQFLKAAE DYGVIKTDMFQTVDLFEGKDMAAVQRTLMALGSLAVTKNDGHYRGDPNWFMKKAQEHK REFTESQLQEGKHVIGLQMGSNRGASQAGMTGYGRPRQIIS" BASE COUNT 328 a 421 c 448 g 282 t ORIGIN 1 caagtcttca ctccttcctg cgagccctga ggaagccttg tgagtgcatt ggctggggct 61 tggagggaag ttgggctgga gctggacagg agcagtgggt gcatttcagg caggctctcc 121 tgaggtccca ggcgccagct ccagctccct ggctagggaa acccaccctc tcagtcagca 181 tgggggccca agctccaggc agggtgggct ggatcactag cgtcctggat ctctctcaga 241 ctgggcagcc ccgggctcat tgaaatgccc cggatgactt ggctagtgca gaggaattga 301 tggaaaccac cggggtgaga gggaggctcc ccatctcagc cagccacatc cacaaggtgt 361 gtgtaagggt gcaggcgccg gccggttagg ccaaggctct actgtctgtt gcccctccag 421 gagaacttcc aaggagcttt ccccagacat ggccaacaag ggtccttcct atggcatgag 481 ccgcgaagtg cagtccaaaa tcgagaagaa gtatgacgag gagctggagg agcggctggt 541 ggagtggatc atagtgcagt gtggccctga tgtgggccgc ccagaccgtg ggcgcttggg 601 cttccaggtc tggctgaaga atggcgtgat tctgagcaag ctggtgaaca gcctgtaccc 661 tgatggctcc aagccggtga aggtgcccga gaacccaccc tccatggtct tcaagcagat 721 ggagcaggtg gctcagttcc tgaaggcggc tgaggactat ggggtcatca agactgacat 781 gttccagact gttgacctct ttgaaggcaa agacatggca gcagtgcaga ggaccctgat 841 ggctttgggc agcttggcag tgaccaagaa tgatgggcac taccgtggag atcccaactg 901 gtttatgaag aaagcgcagg agcataagag ggaattcaca gagagccagc tgcaggaggg 961 aaagcatgtc attggccttc agatgggcag caacagaggg gcctcccagg ccggcatgac 1021 aggctacgga cgacctcggc agatcatcag ttagagcgga gagggctagc cctgagcccg 1081 gccctccccc agctccttgg ctgcagccat cccgcttagc ctgcctcacc cacacccgtg 1141 tggtaccttc agccctggcc aagctttgag gctctgtcac tgagcaatgg taactgcacc 1201 tgggcagctc ctccctgtgc ccccagcctc agcccaactt cttacccgaa agcatcactg 1261 ccttggcccc tccctcccgg ctgcccccat cacctctact gtctcctccc tgggctaagc 1321 aggggagaag cgggctgggg gtagcctgga tgtgggccaa gtccactgtc ctccttggcg 1381 gcaaaagccc attgaagaag aaccagccca gcctgccccc tatcttgtcc tggaatattt 1441 ttggggttgg aactcaaaaa aaaaaaaaaa aaaaaaaaa //