LOCUS BC004911 1517 bp mRNA linear HUM 07-OCT-2003 DEFINITION Homo sapiens Bernardinelli-Seip congenital lipodystrophy 2 (seipin), mRNA (cDNA clone MGC:4694 IMAGE:3533654), complete cds. ACCESSION BC004911 VERSION BC004911.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1517) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1517) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC004911.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 11 Row: n Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21362089. FEATURES Location/Qualifiers source 1..1517 /db_xref="H-InvDB:HIT000032077" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4694 IMAGE:3533654" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1517 /gene="BSCL2" /gene_synonym="GNG3LG" /gene_synonym="MGC4694" /gene_synonym="SEIPIN" /db_xref="GeneID:26580" /db_xref="MIM:606158" CDS 198..1394 /gene="BSCL2" /gene_synonym="GNG3LG" /gene_synonym="MGC4694" /gene_synonym="SEIPIN" /codon_start=1 /product="BSCL2 protein" /protein_id="AAH04911.1" /db_xref="GeneID:26580" /db_xref="MIM:606158" /translation="MVNDPPVPALLWAQEVGQVLAGRARRLLLQFGVLFCTILLLLWV SVFLYGSFYYSYMPTVSHLSPVHFYYRTDCDSSTTSLCSFPVANVSLTKGGRDRVLMY GQPYRVTLELELPESPVNQDLGMFLVTISCYTRGGRIISTSSRSVMLHYRSDLLQMLD TLVFSSLLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHA HFTGLRYLLYNFPMTCAFIGVASNFTFLSVIVLFSYMQWVWGGIWPRHRFSLQVNIRK RDNSRKEVQRRISAHQPGPEGQEESTPQSDVTEDGESPEDPSGTEGQLSEEEKPDQQP LSGEEELEPEASDGSGSWEDAALLTEANLPAPAPASASAPVLETLGSSEPAGGALRQR PTCSSS" BASE COUNT 322 a 453 c 397 g 345 t ORIGIN 1 cccgtctcac ggttgccctg gcagcgcgcg aggctggtga gtcggcagcc ctgtggcagc 61 cggcgggctg gtttccatgg ttgcacgatt aggaaccacc agctgctgca tcccatggcc 121 aggggtggcg tccaggtggc agagcagcta ggaacgcaag gcctgaacct ggggccagac 181 accctgctct cccggccatg gtcaacgacc ctccagtacc tgccttactg tgggcccagg 241 aggtgggcca agtcttggca ggccgtgccc gcaggctgct gctgcagttt ggggtgctct 301 tctgcaccat cctccttttg ctctgggtgt ctgtcttcct ctatggctcc ttctactatt 361 cctatatgcc gacagtcagc cacctcagcc ctgtgcattt ctactacagg accgactgtg 421 attcctccac cacctcactc tgctccttcc ctgttgccaa tgtctcgctg actaagggtg 481 gacgtgatcg ggtgctgatg tatggacagc cgtatcgtgt taccttagag cttgagctgc 541 cagagtcccc tgtgaatcaa gatttgggca tgttcttggt caccatttcc tgctacacca 601 gaggtggccg aatcatctcc acttcttcgc gttcggtgat gctgcattac cgctcagacc 661 tgctccagat gctggacaca ctggtcttct ctagcctcct gctatttggc tttgcagagc 721 agaagcagct gctggaggtg gaactctacg cagactatag agagaactcg tacgtgccga 781 ccactggagc gatcattgag atccacagca agcgcatcca gctgtatgga gcctacctcc 841 gcatccacgc gcacttcact gggctcagat acctgctata caacttcccg atgacctgcg 901 ccttcatagg tgttgccagc aacttcacct tcctcagcgt catcgtgctc ttcagctaca 961 tgcagtgggt gtgggggggc atctggcccc gacaccgctt ctctttgcag gttaacatcc 1021 gaaaaagaga caattcccgg aaggaagtcc aacgaaggat ctctgctcat cagccagggc 1081 ctgaaggcca ggaggagtca actccgcaat cagatgttac agaggatggt gagagccctg 1141 aggatccctc agggacagag ggtcagctgt ccgaggagga gaaaccagat cagcagcccc 1201 tgagcggaga agaggagcta gagcctgagg ccagtgatgg ttcaggctcc tgggaagatg 1261 cagctttgct gacggaggcc aacctgcctg ctcctgctcc tgcttctgct tctgcccctg 1321 tcctagagac tctgggcagc tctgaacctg ctgggggtgc tctccgacag cgccccacct 1381 gctctagttc ctgaagaaaa ggggcagact cctcacattc cagcactttc ccacctgact 1441 cctctcccct cgtttttcct tcaataaact attttgtgtc aaaaaaaaaa aaaaaaaaaa 1501 aaaaaaaaaa aaaaaaa //