LOCUS BC004910 1961 bp mRNA linear HUM 12-NOV-2003
DEFINITION Homo sapiens striatin, calmodulin binding protein 4, mRNA (cDNA
clone IMAGE:3532918), partial cds.
ACCESSION BC004910
VERSION BC004910.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1961)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1961)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC004910.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: h Column: 17.
FEATURES Location/Qualifiers
source 1..1961
/db_xref="H-InvDB:HIT000086413"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3532918"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1961
/gene="STRN4"
/gene_synonym="ZIN"
/gene_synonym="zinedin"
/db_xref="GeneID:29888"
CDS <1..1050
/gene="STRN4"
/gene_synonym="ZIN"
/gene_synonym="zinedin"
/codon_start=1
/product="STRN4 protein"
/protein_id="AAH04910.2"
/db_xref="GeneID:29888"
/translation="LTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHH
SQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYC
YSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCSA
DGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEV
GSALLTLESRGSSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLD
AVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKA
LIASAGADALAKVFV"
misc_feature 76..993
/gene="STRN4"
/gene_synonym="ZIN"
/gene_synonym="zinedin"
/note="WD40; Region: WD40 domain, found in a number of
eukaryotic proteins that cover a wide variety of functions
including adaptor/regulatory modules in signal
transduction, pre-mRNA processing and cytoskeleton
assembly"
/db_xref="CDD:cd00200"
BASE COUNT 365 a 678 c 525 g 393 t
ORIGIN
1 ctcaccgtca ccaacgacaa cgacctcagc tgcgatctgt ctgacagcaa agatgctttt
61 aagaagacgt ggaaccccaa gttcaccctg cgctcgcact acgacggcat tcgttccctg
121 gccttccacc acagccagtc ggctctgctc accgcctccg aggacggcac gctcaagctc
181 tggaacctgc agaaggcggt cacggccaag aagaatgcgg cgctagatgt ggaacctata
241 catgctttcc gggctcacag gggcccagtg ttggctgtgg ctatgggcag caacagtgaa
301 tactgctaca gtggcggggc agatgcctgc atccatagtt ggaagattcc agacctcagc
361 atggatccct atgatggcta cgacccaagc gtgctgagcc acgtcctgga gggccacggg
421 gacgccgtgt ggggcctggc cttcagtccc acctcccagc gcctggcctc ctgttctgct
481 gatggcaccg tccgcatctg ggaccccagc agcagcagcc cggcctgcct ctgcaccttc
541 cccacagcca gcgagcacgg ggtccccacc tcagtggcct tcaccagcac cgagcctgcc
601 cacatcgtgg cctccttccg ctctggcgac accgtcttgt atgacatgga ggttggcagt
661 gccctcctca cgctggagtc ccggggcagc agcggtccaa cccagatcaa ccaagtggtg
721 agtcatccaa accagcctct caccatcacc gcccacgacg acaggggcat ccgcttcctg
781 gacaatcgga caggtaagcc ggtgcactcc atggttgcac acctggacgc agtcacctgc
841 ctagccgtgg accccaacgg cgcattcctg atgtcaggaa gccatgactg ctccctgcgt
901 ctctggagcc tggacaacaa aacgtgcgtg caggagatca cggcccaccg caagaagcac
961 gaggaggcca tccacgctgt tgcctgccac cccagcaagg ccctcattgc cagtgctggc
1021 gctgatgccc tggccaaggt cttcgtatga tgcccacctg gccctgccct ggccgccacg
1081 ctggctgggg tgtagggccg ggcaggtggg gctgagggga ctcccagcct cgctggaggt
1141 gcagaggcct ggcctctgtc tgtttgccgt ggagcctggt ggtgctaacg gccctttccc
1201 caggaatccc tccccaacgg ctgccttccc caagcatcca gcctggggat gggccccttt
1261 caggaatcac ccccgaggat ggcctcgggg tttccccctg tgccctgaca gccgctcctg
1321 gtatcagagc tgctttccag agggcagcac agccagggcc gggtgtcttt agggatcagt
1381 ttttccaaga ctccagaagg tgccaggttc tccccttgag ctcctgctcc cccatccccc
1441 atcctcccag acctgggcag gagctgtgct gggagaaagg gtggcagccg ggagcctcag
1501 agctgagccc cggcctggct gcccctcccc tccggccctc tccactgctt tccagacact
1561 aaccaaggct tccaggccag ggattgccca acactcctag ggcagccctc ccagcccccc
1621 atggggtcgc ccatgggtag agacggcttt cttgtgcccc tccctggggc atggagggtg
1681 gagtgggcct cgggtccccc tgaactccct gtatatctgt ataaataacg ggattttcat
1741 ggcgccgccc cacccgcatt atcactgtgt gatggtctca gtcagtctcc tccctgtctc
1801 cactctttcc ctctatttat ttcactctct tgtttggttc taccctgcac cctcggtccc
1861 cttccaggtt cctgtttata agccccaacc cctctgtccc catcttgtat gtgaaaactt
1921 gtctcaataa accctttgga gtaaaaaaaa aaaaaaaaaa a
//