LOCUS BC004904 2255 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens nuclear RNA export factor 1, mRNA (cDNA clone MGC:4612
IMAGE:3504065), complete cds.
ACCESSION BC004904
VERSION BC004904.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2255)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2255)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004904.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: i Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34335249.
FEATURES Location/Qualifiers
source 1..2255
/db_xref="H-InvDB:HIT000032072"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4612 IMAGE:3504065"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2255
/gene="NXF1"
/gene_synonym="MEX67"
/gene_synonym="TAP"
/db_xref="GeneID:10482"
/db_xref="HGNC:HGNC:8071"
/db_xref="MIM:602647"
CDS 74..1933
/gene="NXF1"
/gene_synonym="MEX67"
/gene_synonym="TAP"
/codon_start=1
/product="nuclear RNA export factor 1"
/protein_id="AAH04904.1"
/db_xref="GeneID:10482"
/db_xref="HGNC:HGNC:8071"
/db_xref="MIM:602647"
/translation="MADEGKSYSEHDDERVNFPQRKKKGRGPFRWKYGEGNRRSGRGG
SGIRSSRLEEDDGDVAMSDAQDGPRVRYNPYTTRPNRRGDTWHDRDRIHVTVRRDRAP
PERGGAGTSQDGTSKNWFKITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQ
FFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSK
RYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNR
LYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQ
STYISAIRERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFGTENLKSLVLHFLQ
QYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNPARSSLAEYFKDSRNVKKLKDPTL
RFRLLKHTRLNVVAFLNELPKTQHDVNSFVVDISAQTSTLLCFSVNGVFKEVDGKSRD
SLRAFTRTFIAVPASNSGLCIVNDELFVRNASSEEIQRAFAMPAPTPSSSPVPTLSPE
QQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKAKGEIPEVAFMK"
BASE COUNT 582 a 589 c 564 g 520 t
ORIGIN
1 gagcgcttgg gagttaggtt gtttgccggc gtagcggcca gcgcctgagc ccgccgttga
61 tcttcgctgt ggcatggcgg acgaggggaa gtcgtacagc gaacacgatg atgaacgcgt
121 taatttccct caaagaaaga agaaaggccg gggtcccttc cggtggaaat atggtgaagg
181 aaaccgtagg tctggaagag gcggttctgg tattcggtct tcccgccttg aggaagatga
241 tggagatgtg gcaatgagtg atgcccagga tggtccccga gtacgataca acccctatac
301 cacccgacct aaccgtcggg gtgatacttg gcatgatcga gatcgcattc atgttactgt
361 gcggagagac agagctcctc cagagagagg aggggctggc accagccagg atgggacctc
421 aaagaactgg ttcaagatta caattcctta tggcagaaag tatgacaagg catggctcct
481 gagcatgatt cagagcaagt gcagtgtgcc cttcacccct attgagtttc actatgagaa
541 tacacgggcc cagttcttcg ttgaagacgc cagtactgcc tctgcattga aggctgtcaa
601 ctataagatt ttggatcggg agaaccgaag gatatctatc atcatcaact cttctgctcc
661 accccacact atactgaatg aactgaagcc agaacaagta gaacagctaa agctgatcat
721 gagcaaacga tacgatggct cccaacaagc ccttgacctc aaaggcctcc gttcagaccc
781 agatttggtg gcccagaaca ttgacgttgt cctgaatcgc agaagctgta tggcagctac
841 cctgaggatc attgaagaga acatccctga gctattgtcc ttgaacttga gcaacaacag
901 gctgtacagg ctggatgaca tgtctagcat tgttcagaag gcacccaacc tgaagatcct
961 aaacctttct ggaaatgaat tgaagtctga gcgggaattg gacaagataa aggggctgaa
1021 gctagaagag ctctggctcg atggaaactc cctgtgtgac accttccgag accagtccac
1081 ctacatcagc gccattcgcg aacgatttcc caagttacta cgcctggatg gccatgagct
1141 acccccacca attgcctttg atgttgaagc ccccacgacg ttaccgccct gcaagggaag
1201 ctattttgga acagaaaact tgaagagtct ggtcttgcac ttcctgcaac agtactatgc
1261 aatttacgac tctggagacc gacaagggct cctggatgcc taccatgatg gggcctgctg
1321 ttccctgagc attcctttca ttcctcagaa ccctgcccga agcagcttag ccgagtattt
1381 caaggatagc agaaatgtga agaagcttaa agaccctacc ttgcggttcc ggctgctgaa
1441 gcacacgcgt ctcaacgttg ttgccttcct caatgagttg cccaaaaccc agcacgacgt
1501 caattccttc gtggtagaca taagcgccca gacaagcaca ttgctgtgtt tttctgtcaa
1561 tggagtcttc aaggaagtgg acggaaagtc ccgggattct ttgcgagcct tcacccggac
1621 attcattgct gttcctgcta gcaattcagg gctatgtatt gtaaatgatg agctatttgt
1681 gcggaatgcc agttctgaag agatccaaag agccttcgct atgcctgcac ccacgccttc
1741 ctccagcccg gtgcccaccc tctctccaga gcagcaggaa atgttgcaag cattctctac
1801 ccagtctggc atgaacctcg agtggtccca gaagtgcctt caggacaaca actgggacta
1861 caccagatct gcccaggcct tcactcatct caaggccaag ggcgagatcc cagaagtggc
1921 attcatgaag tgatcgtagt catgcctcag aagcagtccc ccctgtaaat agtccttgga
1981 tattaccgtc tggttgtcgt ctgtcatctc ctcctgtctg gcccgaggcc gccccgtgac
2041 tgtgaccgag ggagggaggg ctgcctgatc cctctcctcg cctgccttct ggaagacttc
2101 agaagattga gcctcactgg tgccaggaag ccaaagctta ctttgtagaa ctgacactaa
2161 actacccgaa ggacttaggt gctttgtgta cttaacccca ggacctcctt actttttaat
2221 ataaagagtg atgttgtaaa aaaaaaaaaa aaaaa
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