LOCUS BC004888 995 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens sushi domain containing 4, mRNA (cDNA clone MGC:11193
IMAGE:3926397), complete cds.
ACCESSION BC004888
VERSION BC004888.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 995)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 995)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004888.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: j Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922205.
FEATURES Location/Qualifiers
source 1..995
/db_xref="H-InvDB:HIT000032061"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11193 IMAGE:3926397"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..995
/gene="SUSD4"
/gene_synonym="FLJ10052"
/gene_synonym="PRO222"
/gene_synonym="RP11-239E10.4"
/db_xref="GeneID:55061"
/db_xref="HGNC:HGNC:25470"
CDS 63..935
/gene="SUSD4"
/gene_synonym="FLJ10052"
/gene_synonym="PRO222"
/gene_synonym="RP11-239E10.4"
/codon_start=1
/product="sushi domain containing 4"
/protein_id="AAH04888.1"
/db_xref="GeneID:55061"
/db_xref="HGNC:HGNC:25470"
/translation="MYHGMNPSNGDGFLEQQQQQQQPQSPQRLLAVILWFQLALCFGP
AQLTGGFDDLQVCADPGIPENGFRTPSGGVFFEGSVARFHCQDGFKLKGATKRLCLKH
FNGTLGWIPSDNSICVQEDCRIPQIEDAEIHNKTYRHGEKLIITCHEGFKIRYPDLHN
MVSLCRDDGTWNNLPICQGCLRPLASSNGYVNISELQTSFPVGTVISYRCFPGFKLDG
SAYLECLQNLIWSSSPPRCLALEGGRPEHLFPVLYFPHIRLAAAVLYFCPVLKSSPTP
APTCSSTSTTTSLF"
BASE COUNT 250 a 260 c 228 g 257 t
ORIGIN
1 aggaagctgc atgcatgaga cccacagact cttgcaagct ggatgccctc tgtggatgaa
61 agatgtatca tggaatgaac ccgagcaatg gagatggatt tctagagcag cagcagcagc
121 agcagcaacc tcagtccccc cagagactct tggccgtgat cctgtggttt cagctggcgc
181 tgtgcttcgg ccctgcacag ctcacgggcg ggttcgatga ccttcaagtg tgtgctgacc
241 ccggcattcc cgagaatggc ttcaggaccc ccagcggagg ggttttcttt gaaggctctg
301 tagcccgatt tcactgccaa gacggattca agctgaaggg cgctacaaag agactgtgtt
361 tgaagcattt taatggaacc ctaggctgga tcccaagtga taattccatc tgtgtgcaag
421 aagattgccg tatccctcaa atcgaagatg ctgagattca taacaagaca tatagacatg
481 gagagaagct aatcatcact tgtcatgaag gattcaagat ccggtacccc gacctacaca
541 atatggtttc attatgtcgc gatgatggaa cgtggaataa tctgcccatc tgtcaaggct
601 gcctgagacc tctagcctct tctaatggct atgtaaacat ctctgagctc cagacctcct
661 tcccggtggg gactgtgatc tcctatcgct gctttcccgg atttaaactt gatgggtctg
721 cgtatcttga gtgcttacaa aaccttatct ggtcgtccag cccaccccgg tgccttgctc
781 tggaaggagg aagacctgaa catcttttcc ctgtccttta tttcccacac atcaggttgg
841 cagctgctgt gctttatttt tgccctgtgt taaagtcctc tcccacccca gcacctacct
901 gttcctcaac tagcaccacc acatctctgt tctaaatgtt gttctcctgc aataaaggac
961 gtttgaatta aacattcaaa aaaaaaaaaa aaaaa
//