LOCUS BC004882 2337 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens polymerase (RNA) I polypeptide B, 128kDa, mRNA (cDNA
clone IMAGE:3833619), partial cds.
ACCESSION BC004882
VERSION BC004882.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2337)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2337)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC004882.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: d Column: 17.
FEATURES Location/Qualifiers
source 1..2337
/db_xref="H-InvDB:HIT000032056"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3833619"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2337
/gene="POLR1B"
/gene_synonym="FLJ10816"
/gene_synonym="FLJ21921"
/gene_synonym="RPA135"
/gene_synonym="Rpo1-2"
/db_xref="GeneID:84172"
/db_xref="HGNC:HGNC:20454"
/db_xref="MIM:602000"
CDS <1..1750
/gene="POLR1B"
/gene_synonym="FLJ10816"
/gene_synonym="FLJ21921"
/gene_synonym="RPA135"
/gene_synonym="Rpo1-2"
/codon_start=2
/product="POLR1B protein"
/protein_id="AAH04882.4"
/db_xref="GeneID:84172"
/db_xref="HGNC:HGNC:20454"
/db_xref="MIM:602000"
/translation="YPVLLDGVMVGWVDKDLAPGIADSLRHFKVLREKRIPPWMEVVL
IPMTGKPSLYPGLFLFTTPCRLVRPVQNLALGKEELIGTMEQIFMNVAIFEDEVFAGV
TTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYR
LQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHG
SVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRVLQKLDDDGLPFIGAKLQYGDPYYSYL
NLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGKFKCVCITMRVPRNPTIGDKFASRH
GQKGILSRLWPAEDMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCH
DATPFIFSEENSALEYFGEMLKAAGYNFYGTERLYSGISGLELEADIFIGVVYYQRLR
HMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNC
SDRSVAHVCVKCGSLLSPLLEKPPPSWSAMRNRKYNCTLCSRSDTIDTVSVPYVFRYF
VAELAAMNIKVKLDVV"
BASE COUNT 658 a 487 c 524 g 668 t
ORIGIN
1 ctaccctgtc ctgctggacg gtgtcatggt tggctgggtg gataaggatc ttgctccagg
61 catcgcagat tctcttcgtc attttaaggt gttgagagag aaaagaattc ctccctggat
121 ggaagtggtc cttataccca tgacaggaaa accaagtctg tacccaggat tgttcctttt
181 taccactcct tgtagactgg tacggcctgt gcagaactta gcattgggca aagaagagct
241 aattggaact atggaacaga tcttcatgaa tgtcgctatc tttgaggatg aagtttttgc
301 tggagttacc acacaccagg aactctttcc acacagcctg ctgagtgtga ttgccaactt
361 catccctttc tctgatcaca accagagtcc acggaacatg taccaatgcc agatgggtaa
421 gcaaactatg ggctttccac ttctcactta tcaagaccga tcggataaca aactgtatcg
481 tcttcagact cctcagagtc ccttggtgag accctccatg tatgattatt atgacatgga
541 taactatcca attgggacca atgccatcgt tgctgtgatt tcttacactg gctatgatat
601 ggaagatgcc atgattgtga ataaggcctc ttgggaacga ggctttgccc atggaagtgt
661 ctacaagtct gagttcatag acctctctga aaaaattaaa caaggagata gtagcctggt
721 gtttggcatc aaacctggtg acccacgcgt tctgcagaag ttagatgacg atggattgcc
781 gtttatagga gcaaaactgc agtacggaga tccgtattac agctacctca acctcaacac
841 cggggaaagt tttgtgatgt actataagag taaagaaaat tgtgttgtgg ataacatcaa
901 agtgtgcagt aatgacactg ggagtggaaa attcaagtgt gtttgcatca ctatgagagt
961 gcctcggaac ccaactatcg gagataaatt tgccagtcgc catgggcaga agggcatttt
1021 aagcagattg tggccggctg aggacatgcc ttttactgag agtgggatgg tcccagacat
1081 tctgttcaat ccccatggtt ttccatcccg catgaccatt gggatgttaa ttgagagtat
1141 ggccgggaag tctgcagctt tgcatggtct ctgccatgat gctacaccct tcatcttctc
1201 agaggagaac tcggccttag aatactttgg tgagatgtta aaggctgctg gctacaattt
1261 ctatggcacc gagaggttat atagtggcat cagtgggcta gaactggaag cagacatctt
1321 cataggagtg gtttattatc agcgcttacg ccatatggtc tcagacaaat ttcaagtaag
1381 gacaactgga gcccgagaca gagtcaccaa ccagcctatt gggggaagaa atgtccaggg
1441 tggaatccgt tttggggaga tggaacggga tgcgctttta gctcatggta catcttttct
1501 ccttcatgac cgcctcttca actgctcaga tcggtcggta gcccatgtgt gtgtgaagtg
1561 tggcagttta ctctctccac tgttggagaa gccaccccct tcttggtctg ccatgcgcaa
1621 cagaaaatac aactgtactc tgtgtagtcg cagtgacact atcgatactg tttctgtgcc
1681 ttatgttttt cggtattttg tagctgaact ggcagctatg aacatcaaag tgaaactgga
1741 tgttgtttaa cttgatgttg accttttgga ttaagaggac tatcagatta aagcaaaatg
1801 taattttaat tcaatgaaga tatcattacc aggttactct tgagattttt caatggtgtt
1861 agaactctca accaagacct gaaaaccaag tatgcaaggt ttctgaatct ctctggtaga
1921 ttaactattg acaatgattt tctgttatct ttgttcaaaa agttcatgtc ttctcaaaat
1981 atgaaatatt gataaatgga agagcatacg gtgacaagtc tcctttccaa ccccaggttc
2041 cctacaccct gctctcagca ggcagtgagt gtcacacacc tgttaatcca tcttgagcag
2101 gacagtacta tacaaataga atgcaagctg taatgtaatt ttatattttc ttatagccac
2161 gttgaagtaa aaacaaacag gtacagtgtt ttttaccagc tttatagaag tacagttgtt
2221 acatatttaa tgaatacaat ttgatgggtc tgactatatg cacacacctt tgataccatc
2281 accacaatca gggtaataaa catacctgtc atctccaaaa aaaaaaaaaa aaaaaaa
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