LOCUS BC004875 1891 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Yip1 domain family, member 4, mRNA (cDNA clone
MGC:11061 IMAGE:3687693), complete cds.
ACCESSION BC004875
VERSION BC004875.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1891)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1891)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004875.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: c Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147412.
FEATURES Location/Qualifiers
source 1..1891
/db_xref="H-InvDB:HIT000032050"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11061 IMAGE:3687693"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1891
/gene="YIPF4"
/gene_synonym="FinGER4"
/gene_synonym="MGC11061"
/gene_synonym="Nbla11189"
/db_xref="GeneID:84272"
/db_xref="HGNC:HGNC:28145"
CDS 195..929
/gene="YIPF4"
/gene_synonym="FinGER4"
/gene_synonym="MGC11061"
/gene_synonym="Nbla11189"
/codon_start=1
/product="Yip1 domain family, member 4"
/protein_id="AAH04875.1"
/db_xref="GeneID:84272"
/db_xref="HGNC:HGNC:28145"
/translation="MQPPGPPPAYAPTNGDFTFVSSADAEDLSGSIASPDVKLNLGGD
FIKESTATTFLRQRGYGWLLEVEDDDPEDNKPLLEELDIDLKDIYYKIRCVLMPMPSL
GFNRQVVRDNPDFWGPLAVVLFFSMISLYGQFRVVSWIITIWIFGSLTIFLLARVLGG
EVAYGQVLGVIGYSLLPLIVIAPVLLVVGSFEVVSTLIKLFGVFWAAYSAASLLVGEE
FKTKKPLLIYPIFLLYIYFLSLYTGV"
BASE COUNT 545 a 325 c 377 g 644 t
ORIGIN
1 agaagacttt ggtggggtag tctcggggca gctcagcggc ccgctgtgcc cgtttctggc
61 ctcgctcgca gcttgcacgt cgagactcgt aggccgcacc gtagggcgag cgtgcgggtc
121 gccgccgcgg ccgcctcggg gtctgggccc agccgcagcc tcttctaccg cggccggttg
181 ggagtcgccg cgagatgcag cctccgggcc cgcccccggc ctatgccccc actaacgggg
241 acttcacctt tgtctcctca gcagacgcgg aagatctcag tggttcaata gcatccccag
301 atgtcaaatt aaatcttggt ggagatttta tcaaagaatc tacagctact acatttctga
361 gacaaagagg ttatggctgg cttctggaag ttgaagatga tgatcctgaa gataacaagc
421 cactcttgga agaattggac attgatctaa aggatattta ctacaaaatc cgatgtgttt
481 tgatgccaat gccatcactt ggttttaata gacaagtggt gagagacaat cctgactttt
541 ggggtcctct ggctgttgtt cttttctttt ccatgatatc attatatgga cagtttaggg
601 tggtctcatg gattataacc atttggatat ttggttcact aacaattttc ttactggcca
661 gagttcttgg tggagaagtt gcatatggcc aagtccttgg agttatagga tattcattac
721 ttcctctcat tgtaatagcc cctgtacttt tggtggttgg atcatttgaa gtggtgtcta
781 cacttataaa actgtttggt gtgttttggg ctgcctacag tgctgcttca ttgttagtgg
841 gtgaagaatt caagaccaaa aagcctcttc tgatttatcc aatcttttta ttatacattt
901 attttttgtc gttatatact ggtgtgtgat ccaagttata catgaataga aaaagatggt
961 gttaaatttg tgtgtaggct gggaattctt gctgaaggaa ttggagaaaa cctgttgctg
1021 caaaatttta catgttccag atggaaaggg aagtctaagc gctttttaaa acaatttttt
1081 tttgtattta attaagcaat tgcagttatc tgggattttt gggtcagaat tttaaattct
1141 gtttgattct ccatattcca gtgaataaaa tacaaaagca ttgtgttttt aagattgtgt
1201 cgatattcac ctaaaaactt gtgccaaaag cacctggatt ggtaattata tttcacttaa
1261 agggtaaatt tgacaatatc ttgataatca aaagtgcaat ttttttcttc aaaatgtttt
1321 ctccagcatc acagatcctg cagatatata tttatattta tacatatata tttatgaaat
1381 aattcttact cacaaaatat atttctgata aacattaaga tattaaatct gatgcacaaa
1441 ctttaatttg gccattaatc ttttttattt aaaaatttaa atttgttttt aaaattgtat
1501 atagttttta aaatctcaca catgcttcga tacttccttg ttaagaattc ttaataacta
1561 ctaaaactga tttttaatag ttgctgatat atatttggtt tgtttgggta tacttttcaa
1621 aaccattttt gaatgtccaa acatctgatt taaagtttct gtttatcttt ctgaccaaag
1681 gagcaagagg tataatggat atggcattca ttaaaatctt tactatgtac aaaaacagta
1741 atatttacag catcagtaaa tatttttaag tggtacttct aaatcataaa agttggggaa
1801 agagaccttt aaaatcttgt ggtgttgaac aatgttatat gaagtagaaa aaataaaata
1861 cttcccagtt gtgaaaaaaa aaaaaaaaaa a
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