LOCUS       BC004871                2560 bp    mRNA    linear   HUM 03-JAN-2005
DEFINITION  Homo sapiens calsyntenin 2, mRNA (cDNA clone IMAGE:3938696),
            partial cds.
ACCESSION   BC004871
VERSION     BC004871.2
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2560)
  AUTHORS   Director MGC Project.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Dec 9, 2003 this sequence version replaced BC004871.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 14 Row: p Column: 20.
FEATURES             Location/Qualifiers
     source          1..2560
                     /db_xref="H-InvDB:HIT000086407"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3938696"
                     /tissue_type="Lung, small cell carcinoma"
                     /clone_lib="NIH_MGC_7"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            <1..2560
                     /gene="CLSTN2"
                     /gene_synonym="alcagamma"
                     /gene_synonym="CS2"
                     /gene_synonym="CSTN2"
                     /db_xref="GeneID:64084"
     CDS             <1..716
                     /gene="CLSTN2"
                     /gene_synonym="alcagamma"
                     /gene_synonym="CS2"
                     /gene_synonym="CSTN2"
                     /codon_start=3
                     /product="CLSTN2 protein"
                     /protein_id="AAH04871.2"
                     /db_xref="GeneID:64084"
                     /translation="ELHQRHLDATNSTAGYSIYGVGSMSRYEQVLHHIRYRNWRPASL
                     EARRFRIKCSELNGRYTSNEFNLEVSILHEDQVSDKEHVNHLIVQPPFLQSVHHPESR
                     SSIQHSSVVPSIATVVIIISVCMLVFVVAMGVYRVRIAHQHFIQETEAAKESEMDWDD
                     SALTITVNPMEKHEGPGHGEDETEGEEEEEAEEEMSSSSGSDDSEEEEEEEGMGRGRH
                     GQNGARQAQLEWDDSTLPY"
BASE COUNT          658 a          678 c          594 g          630 t
ORIGIN      
        1 gtgagctcca ccaacgacac ctggatgcca ctaattctac tgcaggctac tccatctacg
       61 gtgtgggctc catgagccgc tatgagcagg tgctacatca catccgctac cgcaactggc
      121 gtccggcttc tcttgaggcc cggcgtttcc ggattaagtg ctcagaactc aatgggcgct
      181 acactagcaa tgagttcaac ttggaggtca gcatccttca tgaagaccaa gtctcagata
      241 aggagcatgt caatcatctg attgtgcagc ctcccttcct ccagtctgtc catcatcctg
      301 agtcccggag tagcatccag cacagttcag tggtcccaag cattgccaca gtggtcatca
      361 tcatctccgt gtgcatgctt gtgtttgttg tggccatggg tgtgtaccgg gtccggatcg
      421 cccaccagca cttcatccag gagactgagg ctgccaagga atctgagatg gactgggacg
      481 attctgcgct gactatcaca gtcaacccca tggagaaaca tgaaggacca gggcatgggg
      541 aagatgagac tgagggagaa gaggaggaag aagccgagga agaaatgagc tccagcagtg
      601 gctctgacga cagcgaagag gaggaggagg aggaagggat gggcagaggc agacatgggc
      661 agaatggagc caggcaagcc cagctggagt gggatgactc caccctcccc tactagtgcc
      721 caggggtctg ctgcccggcc cacatgtccc ttttgtaaac cctgacccag tgtatgccca
      781 tgtctatcat acctcacctc tgatgtctgt gacatgtctg ggaaggcctt ctccagcttc
      841 ctggagccca ccctttaagc cttgggcact ccctgtgttt catccatggg gaagttccaa
      901 gaagcccagc atggccatca gtgaggactt cagggtagac tttgtcctgt agcccccact
      961 tctgccctaa gttccccagc atcctgacta cctgtctgca gagtttgcct ttgttttttc
     1021 ctgcagggaa gaaggcccac ctttgtgtca ctcacctccc caggctcaga gtccccaagg
     1081 ccctggggtt ccaactcact gtgcgtctcc tccacacaga ccagcaggtt ctcctatgct
     1141 gactccaggt tgcttcatac aaggagggtg gttgaacttc acacacgtaa ggtcttagtg
     1201 cttaacagtt taaaggaaag tccttgttga ggcagaacta agtttacagg gaaaggtaca
     1261 cacattctct ctctctctct ctctctctct gtctatctag ttccccagct tggagagcct
     1321 ttccccttgc ttctttctga ggccatataa gcttataaga aaagtcccaa accaagaata
     1381 ggtccttggc cacaagcagg gtctgatccc ccatcagagc tatctgagcc tgcctgtctg
     1441 ggcacctgct gcaaccatgc agctaccctg ccaggggcac tcagcaaaca gaaccacagg
     1501 gcccaggagg cattccacac aggcactgcc ccaggacaac acaacaagga cagtcacaac
     1561 aaggacaaca aggacacaac acaacacaca acaaggacag tcacaacaag cctagagcca
     1621 gaaagcagat ggaaatgcta atgaggtcaa acgtaggctt catggtgggt ggagtggggg
     1681 tggctgggct cccccaggac agaggggacc ctgaggttgg caaggctctc accactcagc
     1741 cttatggtcc cttatctcct atcttccctc ttgagaaaat acacgctttc tgcatgtatt
     1801 agaaacgcac gagctccacc aagtctacaa tgaaagtttg aaatttaact gcaaggaatt
     1861 agaagcatat ttgcaatcat tgcagcttct tctttcttct gctcataaaa ggaggaacac
     1921 tttagataga gggcaaatat atctgaaaac ctaatttctt tctttttttg ataaggaaat
     1981 cttttccatc tccatcctaa catgcacaac ctgtgaagag aattgtttct atagtaactg
     2041 gtctgtgatc ttttgtggcc aagagaatag caggcaagaa ttagggcctt gacagaattt
     2101 ccacgaagct ctgagaacat gtttgtttcg aatgtctgat tcctctttgt catcaatgtg
     2161 tatgctctgt ccccatcctt cactcctcct caagctcaca ccaattggtt tggcacaggc
     2221 acagagctgg tccctagtta agtggcattt atgttaaaaa aaaatagttc agaatctcag
     2281 ccttttcttt gtgtcatcaa aacagcttaa gaaggggact actgccaatg tcctctagtc
     2341 tgacctccac ccagggagga cccatggcag gtcttttcaa ctttctgatt catgagaaca
     2401 accttgtgaa gcttttccca cctcctaaag tgttttctgc atctgttcct tcctttggac
     2461 ctcacaacaa atcctgtgaa gtaactgaga catctgttgt tagatacatt tttgtgatga
     2521 gtaaactgag gcttcgtgat tcaaaaaaaa aaaaaaaaaa
//