LOCUS BC004871 2560 bp mRNA linear HUM 03-JAN-2005 DEFINITION Homo sapiens calsyntenin 2, mRNA (cDNA clone IMAGE:3938696), partial cds. ACCESSION BC004871 VERSION BC004871.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2560) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2560) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC004871.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 14 Row: p Column: 20. FEATURES Location/Qualifiers source 1..2560 /db_xref="H-InvDB:HIT000086407" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3938696" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..2560 /gene="CLSTN2" /gene_synonym="alcagamma" /gene_synonym="CS2" /gene_synonym="CSTN2" /db_xref="GeneID:64084" CDS <1..716 /gene="CLSTN2" /gene_synonym="alcagamma" /gene_synonym="CS2" /gene_synonym="CSTN2" /codon_start=3 /product="CLSTN2 protein" /protein_id="AAH04871.2" /db_xref="GeneID:64084" /translation="ELHQRHLDATNSTAGYSIYGVGSMSRYEQVLHHIRYRNWRPASL EARRFRIKCSELNGRYTSNEFNLEVSILHEDQVSDKEHVNHLIVQPPFLQSVHHPESR SSIQHSSVVPSIATVVIIISVCMLVFVVAMGVYRVRIAHQHFIQETEAAKESEMDWDD SALTITVNPMEKHEGPGHGEDETEGEEEEEAEEEMSSSSGSDDSEEEEEEEGMGRGRH GQNGARQAQLEWDDSTLPY" BASE COUNT 658 a 678 c 594 g 630 t ORIGIN 1 gtgagctcca ccaacgacac ctggatgcca ctaattctac tgcaggctac tccatctacg 61 gtgtgggctc catgagccgc tatgagcagg tgctacatca catccgctac cgcaactggc 121 gtccggcttc tcttgaggcc cggcgtttcc ggattaagtg ctcagaactc aatgggcgct 181 acactagcaa tgagttcaac ttggaggtca gcatccttca tgaagaccaa gtctcagata 241 aggagcatgt caatcatctg attgtgcagc ctcccttcct ccagtctgtc catcatcctg 301 agtcccggag tagcatccag cacagttcag tggtcccaag cattgccaca gtggtcatca 361 tcatctccgt gtgcatgctt gtgtttgttg tggccatggg tgtgtaccgg gtccggatcg 421 cccaccagca cttcatccag gagactgagg ctgccaagga atctgagatg gactgggacg 481 attctgcgct gactatcaca gtcaacccca tggagaaaca tgaaggacca gggcatgggg 541 aagatgagac tgagggagaa gaggaggaag aagccgagga agaaatgagc tccagcagtg 601 gctctgacga cagcgaagag gaggaggagg aggaagggat gggcagaggc agacatgggc 661 agaatggagc caggcaagcc cagctggagt gggatgactc caccctcccc tactagtgcc 721 caggggtctg ctgcccggcc cacatgtccc ttttgtaaac cctgacccag tgtatgccca 781 tgtctatcat acctcacctc tgatgtctgt gacatgtctg ggaaggcctt ctccagcttc 841 ctggagccca ccctttaagc cttgggcact ccctgtgttt catccatggg gaagttccaa 901 gaagcccagc atggccatca gtgaggactt cagggtagac tttgtcctgt agcccccact 961 tctgccctaa gttccccagc atcctgacta cctgtctgca gagtttgcct ttgttttttc 1021 ctgcagggaa gaaggcccac ctttgtgtca ctcacctccc caggctcaga gtccccaagg 1081 ccctggggtt ccaactcact gtgcgtctcc tccacacaga ccagcaggtt ctcctatgct 1141 gactccaggt tgcttcatac aaggagggtg gttgaacttc acacacgtaa ggtcttagtg 1201 cttaacagtt taaaggaaag tccttgttga ggcagaacta agtttacagg gaaaggtaca 1261 cacattctct ctctctctct ctctctctct gtctatctag ttccccagct tggagagcct 1321 ttccccttgc ttctttctga ggccatataa gcttataaga aaagtcccaa accaagaata 1381 ggtccttggc cacaagcagg gtctgatccc ccatcagagc tatctgagcc tgcctgtctg 1441 ggcacctgct gcaaccatgc agctaccctg ccaggggcac tcagcaaaca gaaccacagg 1501 gcccaggagg cattccacac aggcactgcc ccaggacaac acaacaagga cagtcacaac 1561 aaggacaaca aggacacaac acaacacaca acaaggacag tcacaacaag cctagagcca 1621 gaaagcagat ggaaatgcta atgaggtcaa acgtaggctt catggtgggt ggagtggggg 1681 tggctgggct cccccaggac agaggggacc ctgaggttgg caaggctctc accactcagc 1741 cttatggtcc cttatctcct atcttccctc ttgagaaaat acacgctttc tgcatgtatt 1801 agaaacgcac gagctccacc aagtctacaa tgaaagtttg aaatttaact gcaaggaatt 1861 agaagcatat ttgcaatcat tgcagcttct tctttcttct gctcataaaa ggaggaacac 1921 tttagataga gggcaaatat atctgaaaac ctaatttctt tctttttttg ataaggaaat 1981 cttttccatc tccatcctaa catgcacaac ctgtgaagag aattgtttct atagtaactg 2041 gtctgtgatc ttttgtggcc aagagaatag caggcaagaa ttagggcctt gacagaattt 2101 ccacgaagct ctgagaacat gtttgtttcg aatgtctgat tcctctttgt catcaatgtg 2161 tatgctctgt ccccatcctt cactcctcct caagctcaca ccaattggtt tggcacaggc 2221 acagagctgg tccctagtta agtggcattt atgttaaaaa aaaatagttc agaatctcag 2281 ccttttcttt gtgtcatcaa aacagcttaa gaaggggact actgccaatg tcctctagtc 2341 tgacctccac ccagggagga cccatggcag gtcttttcaa ctttctgatt catgagaaca 2401 accttgtgaa gcttttccca cctcctaaag tgttttctgc atctgttcct tcctttggac 2461 ctcacaacaa atcctgtgaa gtaactgaga catctgttgt tagatacatt tttgtgatga 2521 gtaaactgag gcttcgtgat tcaaaaaaaa aaaaaaaaaa //